Gm25279 Gene Detail

Summary

• Symbol
  Gm25279
• Name
  predicted gene, 25279

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5455056
  NCBI Gene: 115487698
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:151730622-151730706 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  121 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455056	snRNA gene	Chr1:151730574-151730706 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037196	snRNA gene	Chr1:156607276-156607408 (-)
A/J	MGP_AJ_G0037182	snRNA gene	Chr1:150286028-150286160 (-)
AKR/J	MGP_AKRJ_G0037128	snRNA gene	Chr1:154924184-154924316 (-)
BALB/cJ	MGP_BALBcJ_G0037174	snRNA gene	Chr1:150859217-150859349 (-)
C3H/HeJ	MGP_C3HHeJ_G0036857	snRNA gene	Chr1:155039549-155039681 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037686	snRNA gene	Chr1:162022620-162027931 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034718	snRNA gene	Chr1:142615459-142615590 (-)
CAST/EiJ	MGP_CASTEiJ_G0036042	snRNA gene	Chr1:154492695-154492827 (-)
CBA/J	MGP_CBAJ_G0036833	snRNA gene	Chr1:167722441-167722573 (-)
DBA/2J	MGP_DBA2J_G0037008	snRNA gene	Chr1:149324751-149324883 (-)
FVB/NJ	MGP_FVBNJ_G0036958	snRNA gene	Chr1:147779762-147779894 (-)
LP/J	MGP_LPJ_G0037055	snRNA gene	Chr1:157680634-157680766 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036968	snRNA gene	Chr1:175399556-175399688 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037804	snRNA gene	Chr1:154683789-154683921 (-)
PWK/PhJ	MGP_PWKPhJ_G0035738	snRNA gene	Chr1:148295632-148295764 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035541	snRNA gene	Chr1:153520423-153520558 (-)
WSB/EiJ	MGP_WSBEiJ_G0036248	snRNA gene	Chr1:154772929-154773061 (-)

Homology

• Gene Tree
  Gm25279
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000084557 (Evidence)
• NCBI Gene
  115487698

Representative Sequences			Length	Strain/Species
genomic	115487698	NCBI Gene Model | MGI Sequence Detail	85	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;