Gm25390 Gene Detail

Summary

• Symbol
  Gm25390
• Name
  predicted gene, 25390

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5455167
  NCBI Gene: 115487499
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:90841605-90841705 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455167	snRNA gene	Chr10:90841603-90841705 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037267	snRNA gene	Chr10:92275488-92275590 (+)
A/J	MGP_AJ_G0037253	snRNA gene	Chr10:89082939-89083041 (+)
AKR/J	MGP_AKRJ_G0037199	snRNA gene	Chr10:91629219-91629321 (+)
BALB/cJ	MGP_BALBcJ_G0037245	snRNA gene	Chr10:89369886-89369988 (+)
C3H/HeJ	MGP_C3HHeJ_G0036927	snRNA gene	Chr10:91655629-91655731 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037758	snRNA gene	Chr10:95341725-95341827 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034779	snRNA gene	Chr10:84760397-84760499 (+)
CAST/EiJ	MGP_CASTEiJ_G0036107	snRNA gene	Chr10:91581449-91581552 (+)
CBA/J	MGP_CBAJ_G0036901	snRNA gene	Chr10:99269624-99269726 (+)
DBA/2J	MGP_DBA2J_G0037078	snRNA gene	Chr10:88207814-88207916 (+)
FVB/NJ	MGP_FVBNJ_G0037026	snRNA gene	Chr10:87428459-87428561 (+)
LP/J	MGP_LPJ_G0037126	snRNA gene	Chr10:92907897-92907999 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037038	snRNA gene	Chr10:100730109-100730211 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0035805	snRNA gene	Chr10:88251491-88251593 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035605	snRNA gene	Chr10:90286783-90286885 (+)
WSB/EiJ	MGP_WSBEiJ_G0036318	snRNA gene	Chr10:91500230-91500332 (+)

Homology

• Gene Tree
  Gm25390
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087966 (Evidence)
• NCBI Gene
  115487499

Representative Sequences			Length	Strain/Species
genomic	115487499	NCBI Gene Model | MGI Sequence Detail	101	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;