Gm25394 Gene Detail

Summary

• Symbol
  Gm25394
• Name
  predicted gene, 25394

• Feature Type
  snoRNA gene
• IDs
  MGI:5455171
  NCBI Gene: 115488237
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:49837777-49837909 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455171	snoRNA gene	Chr13:49837777-49837909 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038702	snoRNA gene	Chr13:48667573-48667705 (+)
A/J	MGP_AJ_G0038695	snoRNA gene	Chr13:46955332-46955464 (+)
AKR/J	MGP_AKRJ_G0038630	snoRNA gene	Chr13:48273400-48273532 (+)
BALB/cJ	MGP_BALBcJ_G0038680	snoRNA gene	Chr13:47157007-47157139 (+)
C3H/HeJ	MGP_C3HHeJ_G0038342	snoRNA gene	Chr13:48092359-48092491 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039225	snoRNA gene	Chr13:50139173-50139305 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035976	snoRNA gene	Chr13:44902560-44902692 (+)
CAST/EiJ	MGP_CASTEiJ_G0037483	snoRNA gene	Chr13:48108154-48108286 (+)
CBA/J	MGP_CBAJ_G0038314	snoRNA gene	Chr13:52207969-52208101 (+)
DBA/2J	MGP_DBA2J_G0038503	snoRNA gene	Chr13:46465703-46465835 (+)
FVB/NJ	MGP_FVBNJ_G0038456	snoRNA gene	Chr13:45993434-45993566 (+)
LP/J	MGP_LPJ_G0038542	snoRNA gene	Chr13:48887936-48888068 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038454	snoRNA gene	Chr13:51915126-51915258 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039328	snoRNA gene	Chr13:47956628-47956760 (+)
PWK/PhJ	MGP_PWKPhJ_G0037169	snoRNA gene	Chr13:46650608-46650740 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036926	snoRNA gene	Chr13:46666129-46666261 (+)
WSB/EiJ	MGP_WSBEiJ_G0037713	snoRNA gene	Chr13:48286564-48286696 (+)

Homology

• Gene Tree
  Gm25394
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087963 (Evidence)
• NCBI Gene
  115488237

Representative Sequences			Length	Strain/Species
genomic	115488237	NCBI Gene Model | MGI Sequence Detail	133	C57BL/6J
transcript	XR_004938310	RefSeq | MGI Sequence Detail	133	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;