Gm25396 Gene Detail

Summary

• Symbol
  Gm25396
• Name
  predicted gene, 25396

• Feature Type
  snoRNA gene
• IDs
  MGI:5455173
  NCBI Gene: 115486050
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:31599288-31599420 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455173	snoRNA gene	Chr18:31599288-31599420 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038922	snoRNA gene	Chr18:29563763-29563895 (-)
A/J	MGP_AJ_G0038917	snoRNA gene	Chr18:28594409-28594541 (-)
AKR/J	MGP_AKRJ_G0038852	snoRNA gene	Chr18:29378074-29378204 (-)
BALB/cJ	MGP_BALBcJ_G0038900	snoRNA gene	Chr18:28685467-28685599 (-)
C3H/HeJ	MGP_C3HHeJ_G0038564	snoRNA gene	Chr18:29398945-29399077 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039449	snoRNA gene	Chr18:30612912-30613044 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036179	snoRNA gene	Chr18:28811192-28811322 (-)
CAST/EiJ	MGP_CASTEiJ_G0037705	snoRNA gene	Chr18:29297908-29298040 (-)
CBA/J	MGP_CBAJ_G0038536	snoRNA gene	Chr18:31581406-31581538 (-)
DBA/2J	MGP_DBA2J_G0038724	snoRNA gene	Chr18:28269790-28269922 (-)
FVB/NJ	MGP_FVBNJ_G0038676	snoRNA gene	Chr18:27981636-27981766 (-)
LP/J	MGP_LPJ_G0038764	snoRNA gene	Chr18:29647845-29647977 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038677	snoRNA gene	Chr18:32928552-32928684 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039551	snoRNA gene	Chr18:29248418-29248550 (-)
PWK/PhJ	MGP_PWKPhJ_G0037391	snoRNA gene	Chr18:28420436-28420566 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037145	snoRNA gene	Chr18:29462600-29462729 (-)
WSB/EiJ	MGP_WSBEiJ_G0037933	snoRNA gene	Chr18:29139767-29139899 (-)

Homology

• Gene Tree
  Gm25396
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077169 (Evidence)
• NCBI Gene
  115486050

Representative Sequences			Length	Strain/Species
genomic	115486050	NCBI Gene Model | MGI Sequence Detail	133	C57BL/6J
transcript	XR_004940064	RefSeq | MGI Sequence Detail	133	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;