Gm25418 Gene Detail

Summary

• Symbol
  Gm25418
• Name
  predicted gene, 25418

• Feature Type
  snoRNA gene
• IDs
  MGI:5455195
  NCBI Gene: 115486049
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:90522739-90522867 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  55 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455195	snoRNA gene	Chr18:90522739-90522867 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0038947	snoRNA gene	Chr18:91863928-91864056 (+)
A/J	MGP_AJ_G0038942	snoRNA gene	Chr18:87745698-87745826 (+)
AKR/J	MGP_AKRJ_G0038877	snoRNA gene	Chr18:90379251-90379379 (+)
BALB/cJ	MGP_BALBcJ_G0038925	snoRNA gene	Chr18:88072842-88072970 (+)
C3H/HeJ	MGP_C3HHeJ_G0038589	snoRNA gene	Chr18:90625077-90625205 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0039474	snoRNA gene	Chr18:94237713-94237841 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0037730	snoRNA gene	Chr18:91005031-91005159 (+)
CBA/J	MGP_CBAJ_G0038560	snoRNA gene	Chr18:97623813-97623941 (+)
DBA/2J	MGP_DBA2J_G0038749	snoRNA gene	Chr18:87380141-87380269 (+)
FVB/NJ	MGP_FVBNJ_G0038701	snoRNA gene	Chr18:86633656-86633784 (+)
LP/J	MGP_LPJ_G0038789	snoRNA gene	Chr18:91792611-91792739 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038702	snoRNA gene	Chr18:99644209-99644337 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039576	snoRNA gene	Chr18:90724742-90724870 (+)
PWK/PhJ	MGP_PWKPhJ_G0037416	snoRNA gene	Chr18:87659091-87659219 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037169	snoRNA gene	Chr18:90566274-90566399 (+)
WSB/EiJ	MGP_WSBEiJ_G0037958	snoRNA gene	Chr18:90595581-90595709 (+)

Homology

• Gene Tree
  Gm25418
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Spontaneous
  1
• Genomic Mutations
  1 involving Gm25418
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000077402 (Evidence)
• NCBI Gene
  115486049

Representative Sequences			Length	Strain/Species
genomic	115486049	NCBI Gene Model | MGI Sequence Detail	129	C57BL/6J
transcript	XR_004940063	RefSeq | MGI Sequence Detail	129	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:45709 Melloy PG, et al., No turning, a mouse mutation causing left-right and axial patterning defects. Dev Biol. 1998 Jan 1;193(1):77-89
• Latest
  J:132045 Chatterjee B, et al., Nt mutation causing laterality defects associated with deletion of rotatin. Mamm Genome. 2007 May;18(5):310-5