Gm25429 Gene Detail

Summary

• Symbol
  Gm25429
• Name
  predicted gene, 25429

• Feature Type
  snoRNA gene
• IDs
  MGI:5455206
  NCBI Gene: 115486108
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:153922892-153923023 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  50 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455206	snoRNA gene	ChrX:153922892-153923023 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039620	snoRNA gene	ChrX:153021974-153022105 (+)
A/J	MGP_AJ_G0039621	snoRNA gene	ChrX:152305795-152305926 (+)
AKR/J	MGP_AKRJ_G0039547	snoRNA gene	ChrX:157115507-157115638 (+)
BALB/cJ	MGP_BALBcJ_G0039596	snoRNA gene	ChrX:150403712-150403843 (+)
C3H/HeJ	MGP_C3HHeJ_G0039257	snoRNA gene	ChrX:153354344-153354475 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040149	snoRNA gene	ChrX:157478176-157478307 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038383	snoRNA gene	ChrX:132517769-132517900 (+)
CBA/J	MGP_CBAJ_G0039227	snoRNA gene	ChrX:161971570-161971701 (+)
DBA/2J	MGP_DBA2J_G0039419	snoRNA gene	ChrX:151311547-151311678 (+)
FVB/NJ	MGP_FVBNJ_G0039376	snoRNA gene	ChrX:150418629-150418760 (+)
LP/J	MGP_LPJ_G0039462	snoRNA gene	ChrX:154123788-154123919 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039375	snoRNA gene	ChrX:170329310-170329441 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040249	snoRNA gene	ChrX:152602818-152602949 (+)
PWK/PhJ	MGP_PWKPhJ_G0038060	snoRNA gene	ChrX:129509906-129510037 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037809	snoRNA gene	ChrX:132964601-132964732 (+)
WSB/EiJ	MGP_WSBEiJ_G0038610	snoRNA gene	ChrX:150599326-150599457 (+)

Homology

• Gene Tree
  Gm25429
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000088232 (Evidence)
• NCBI Gene
  115486108

Representative Sequences			Length	Strain/Species
genomic	115486108	NCBI Gene Model | MGI Sequence Detail	132	C57BL/6J
transcript	XR_004940555	RefSeq | MGI Sequence Detail	132	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;