Gm25520 Gene Detail

Summary

• Symbol
  Gm25520
• Name
  predicted gene, 25520

• Feature Type
  snoRNA gene
• IDs
  MGI:5455297
  NCBI Gene: 115489214
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:74145015-74145132 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455297	snoRNA gene	ChrX:74145015-74145132 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039588	snoRNA gene	ChrX:70932352-70932469 (+)
A/J	MGP_AJ_G0039587	snoRNA gene	ChrX:71138242-71138359 (+)
AKR/J	MGP_AKRJ_G0039513	snoRNA gene	ChrX:73023085-73023202 (+)
BALB/cJ	MGP_BALBcJ_G0039566	snoRNA gene	ChrX:70162660-70162777 (+)
C3H/HeJ	MGP_C3HHeJ_G0039225	snoRNA gene	ChrX:71409934-71410051 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040118	snoRNA gene	ChrX:73219429-73219546 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036758	snoRNA gene	ChrX:70606084-70606201 (+)
CAST/EiJ	MGP_CASTEiJ_G0038351	snoRNA gene	ChrX:56773410-56773527 (+)
CBA/J	MGP_CBAJ_G0039195	snoRNA gene	ChrX:75173399-75173516 (+)
DBA/2J	MGP_DBA2J_G0039389	snoRNA gene	ChrX:70619234-70619351 (+)
FVB/NJ	MGP_FVBNJ_G0039344	snoRNA gene	ChrX:69928629-69928746 (+)
LP/J	MGP_LPJ_G0039429	snoRNA gene	ChrX:71743593-71743710 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039345	snoRNA gene	ChrX:77775166-77775283 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040214	snoRNA gene	ChrX:70785183-70785300 (+)
PWK/PhJ	MGP_PWKPhJ_G0038030	snoRNA gene	ChrX:54772096-54772213 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0037781	snoRNA gene	ChrX:57597103-57597220 (+)
WSB/EiJ	MGP_WSBEiJ_G0038580	snoRNA gene	ChrX:70026312-70026429 (+)

Homology

• Gene Tree
  Gm25520
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000089014 (Evidence)
• NCBI Gene
  115489214

Representative Sequences			Length	Strain/Species
genomic	115489214	NCBI Gene Model | MGI Sequence Detail	118	C57BL/6J
transcript	XR_004940520	RefSeq | MGI Sequence Detail	118	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;