Gm25560 Gene Detail

Summary

• Symbol
  Gm25560
• Name
  predicted gene, 25560

• Feature Type
  snRNA gene
  BioType Conflict
  
• IDs
  MGI:5455337
  NCBI Gene: 115487693
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:175628080-175628255 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455337	snRNA gene	Chr1:175628080-175628259 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037207	snRNA gene	Chr1:181909374-181909549 (+)
A/J	MGP_AJ_G0037194	snRNA gene	Chr1:174580357-174580532 (+)
AKR/J	MGP_AKRJ_G0037140	snRNA gene	Chr1:179797395-179797570 (+)
BALB/cJ	MGP_BALBcJ_G0037186	snRNA gene	Chr1:175111624-175111799 (+)
C3H/HeJ	MGP_C3HHeJ_G0036868	snRNA gene	Chr1:180403445-180403620 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037699	snRNA gene	Chr1:187912710-187912885 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034728	snRNA gene	Chr1:165889557-165889732 (+)
CAST/EiJ	MGP_CASTEiJ_G0036052	snRNA gene	Chr1:179779467-179779642 (+)
CBA/J	MGP_CBAJ_G0036844	snRNA gene	Chr1:194752851-194753026 (+)
DBA/2J	MGP_DBA2J_G0037019	snRNA gene	Chr1:173434410-173434585 (+)
FVB/NJ	MGP_FVBNJ_G0036970	snRNA gene	Chr1:171557870-171558045 (+)
LP/J	MGP_LPJ_G0037067	snRNA gene	Chr1:183097430-183097605 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036980	snRNA gene	Chr1:202005877-202006052 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037816	snRNA gene	Chr1:179566251-179566426 (+)
PWK/PhJ	MGP_PWKPhJ_G0035748	snRNA gene	Chr1:172520699-172520874 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035552	snRNA gene	Chr1:178605915-178606087 (+)
WSB/EiJ	MGP_WSBEiJ_G0036259	snRNA gene	Chr1:179762674-179762849 (+)

Homology

• Gene Tree
  Gm25560
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000077794 (Evidence)
• NCBI Gene
  115487693

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000077794	Ensembl Gene Model | MGI Sequence Detail	176	C57BL/6J
transcript	ENSMUST00000104606	Ensembl | MGI Sequence Detail	176	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;