Gm25587 Gene Detail

Summary

• Symbol
  Gm25587
• Name
  predicted gene, 25587

• Feature Type
  snRNA gene
• IDs
  MGI:5455364
  NCBI Gene: 115487512
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:104876134-104876299 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  198 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455364	snRNA gene	Chr10:104876134-104876299 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037274	snRNA gene	Chr10:107113246-107113411 (+)
A/J	MGP_AJ_G0037260	snRNA gene	Chr10:103150406-103150573 (+)
AKR/J	MGP_AKRJ_G0037205	snRNA gene	Chr10:106134697-106134862 (+)
BALB/cJ	MGP_BALBcJ_G0037252	snRNA gene	Chr10:103531094-103531261 (+)
C3H/HeJ	MGP_C3HHeJ_G0036934	snRNA gene	Chr10:106180095-106180260 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037765	snRNA gene	Chr10:110854348-110854513 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034784	snRNA gene	Chr10:98197996-98198164 (+)
CAST/EiJ	MGP_CASTEiJ_G0036113	snRNA gene	Chr10:106271105-106271270 (+)
CBA/J	MGP_CBAJ_G0036908	snRNA gene	Chr10:115118092-115118257 (+)
DBA/2J	MGP_DBA2J_G0037085	snRNA gene	Chr10:102253841-102254008 (+)
FVB/NJ	MGP_FVBNJ_G0037033	snRNA gene	Chr10:101334148-101334313 (+)
LP/J	MGP_LPJ_G0037133	snRNA gene	Chr10:107728978-107729143 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037045	snRNA gene	Chr10:117376172-117376337 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037882	snRNA gene	Chr10:106106875-106107040 (+)
PWK/PhJ	MGP_PWKPhJ_G0035812	snRNA gene	Chr10:102313495-102313660 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035611	snRNA gene	Chr10:104843388-104843553 (+)
WSB/EiJ	MGP_WSBEiJ_G0036323	snRNA gene	Chr10:106212784-106212949 (+)

Homology

• Gene Tree
  Gm25587
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000064432 (Evidence)
• NCBI Gene
  115487512

Representative Sequences			Length	Strain/Species
genomic	115487512	NCBI Gene Model | MGI Sequence Detail	166	C57BL/6J
transcript	XR_004936567	RefSeq | MGI Sequence Detail	166	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm25587:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95613	Chr10:104876124-104876153 (+)	5 bp