Gm25609 Gene Detail

Summary

• Symbol
  Gm25609
• Name
  predicted gene, 25609

• Feature Type
  snRNA gene
• IDs
  MGI:5455386
  NCBI Gene: 115487600
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:137143282-137143385 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  154 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455386	snRNA gene	Chr1:137143282-137143385 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037188	snRNA gene	Chr1:141152269-141152372 (-)
A/J	MGP_AJ_G0037173	snRNA gene	Chr1:135733602-135733705 (-)
AKR/J	MGP_AKRJ_G0037122	snRNA gene	Chr1:139803331-139803434 (-)
BALB/cJ	MGP_BALBcJ_G0037165	snRNA gene	Chr1:136074345-136074448 (-)
C3H/HeJ	MGP_C3HHeJ_G0036850	snRNA gene	Chr1:139894588-139894691 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037679	snRNA gene	Chr1:146154768-146154871 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034713	snRNA gene	Chr1:128838690-128838793 (-)
CAST/EiJ	MGP_CASTEiJ_G0036035	snRNA gene	Chr1:139048625-139048728 (-)
CBA/J	MGP_CBAJ_G0036826	snRNA gene	Chr1:151206252-151206355 (-)
DBA/2J	MGP_DBA2J_G0037002	snRNA gene	Chr1:134725538-134725641 (-)
FVB/NJ	MGP_FVBNJ_G0036950	snRNA gene	Chr1:133374061-133374164 (-)
LP/J	MGP_LPJ_G0037049	snRNA gene	Chr1:142313604-142313707 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036961	snRNA gene	Chr1:156830384-156830487 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037797	snRNA gene	Chr1:139582942-139583045 (-)
PWK/PhJ	MGP_PWKPhJ_G0035731	snRNA gene	Chr1:133796110-133796213 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035535	snRNA gene	Chr1:138555016-138555119 (-)
WSB/EiJ	MGP_WSBEiJ_G0036241	snRNA gene	Chr1:139599291-139599394 (-)

Homology

• Gene Tree
  Gm25609
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000077207 (Evidence)
• NCBI Gene
  115487600

Representative Sequences			Length	Strain/Species
genomic	115487600	NCBI Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	XR_004936715	RefSeq | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;