Gm25622 Gene Detail

Summary

• Symbol
  Gm25622
• Name
  predicted gene, 25622

• Feature Type
  snRNA gene
• IDs
  MGI:5455399
  NCBI Gene: 115488037
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:113177769-113177872 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455399	snRNA gene	Chr12:113177769-113177872 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037409	snRNA gene	Chr12:115716180-115716283 (+)
A/J	MGP_AJ_G0037401	snRNA gene	Chr12:111231465-111231568 (+)
AKR/J	MGP_AKRJ_G0037342	snRNA gene	Chr12:114466330-114466433 (+)
BALB/cJ	MGP_BALBcJ_G0037387	snRNA gene	Chr12:111694259-111694362 (+)
C3H/HeJ	MGP_C3HHeJ_G0037065	snRNA gene	Chr12:114987325-114987428 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037904	snRNA gene	Chr12:119250020-119250123 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034892	snRNA gene	Chr12:107658287-107658390 (+)
CAST/EiJ	MGP_CASTEiJ_G0036243	snRNA gene	Chr12:109834187-109834290 (+)
CBA/J	MGP_CBAJ_G0037039	snRNA gene	Chr12:123838057-123838160 (+)
DBA/2J	MGP_DBA2J_G0037217	snRNA gene	Chr12:110732094-110732197 (+)
FVB/NJ	MGP_FVBNJ_G0037165	snRNA gene	Chr12:109576785-109576888 (+)
LP/J	MGP_LPJ_G0037268	snRNA gene	Chr12:115536147-115536250 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037180	snRNA gene	Chr12:126913578-126913681 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038020	snRNA gene	Chr12:113976671-113976774 (+)
PWK/PhJ	MGP_PWKPhJ_G0035939	snRNA gene	Chr12:105395267-105395370 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035731	snRNA gene	Chr12:108168059-108168182 (+)
WSB/EiJ	MGP_WSBEiJ_G0036450	snRNA gene	Chr12:114893123-114893226 (+)

Homology

• Gene Tree
  Gm25622
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087842 (Evidence)
• NCBI Gene
  115488037

Representative Sequences			Length	Strain/Species
genomic	115488037	NCBI Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	XR_004937828	RefSeq | MGI Sequence Detail	104	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;