Gm25681 Gene Detail

Summary

• Symbol
  Gm25681
• Name
  predicted gene, 25681

• Feature Type
  snRNA gene
• IDs
  MGI:5455458
  NCBI Gene: 115489771
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:109771096-109771201 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455458	snRNA gene	Chr3:109771096-109771201 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0037848	snRNA gene	Chr3:111499390-111499495 (+)
A/J	MGP_AJ_G0037834	snRNA gene	Chr3:107934105-107934210 (+)
AKR/J	MGP_AKRJ_G0037346	snRNA gene	Chr13:7402300-7402405 (-)
BALB/cJ	MGP_BALBcJ_G0037819	snRNA gene	Chr3:107645936-107646041 (+)
C3H/HeJ	MGP_C3HHeJ_G0037493	snRNA gene	Chr3:110929119-110929224 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0038348	snRNA gene	Chr3:115622076-115622181 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0036656	snRNA gene	Chr3:110351764-110351870 (+)
CBA/J	MGP_CBAJ_G0037466	snRNA gene	Chr3:119595350-119595455 (+)
DBA/2J	MGP_DBA2J_G0037650	snRNA gene	Chr3:107119558-107119663 (+)
FVB/NJ	MGP_FVBNJ_G0037596	snRNA gene	Chr3:104977791-104977896 (+)
LP/J	MGP_LPJ_G0037699	snRNA gene	Chr3:112927594-112927699 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037609	snRNA gene	Chr3:125605674-125605779 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038459	snRNA gene	Chr3:110182389-110182494 (+)
PWK/PhJ	MGP_PWKPhJ_G0036350	snRNA gene	Chr3:106879251-106879357 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0036128	snRNA gene	Chr3:108359472-108359577 (+)
WSB/EiJ	MGP_WSBEiJ_G0036870	snRNA gene	Chr3:110726964-110727069 (+)

Homology

• Gene Tree
  Gm25681
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000065872 (Evidence)
• NCBI Gene
  115489771

Representative Sequences			Length	Strain/Species
genomic	115489771	NCBI Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	XR_004941655	RefSeq | MGI Sequence Detail	106	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;