Gm25728 Gene Detail

Summary

• Symbol
  Gm25728
• Name
  predicted gene, 25728

• Feature Type
  snRNA gene
• IDs
  MGI:5455505
  NCBI Gene: 115489252
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:9398750-9398908 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455505	snRNA gene	ChrX:9398746-9398908 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038290	snRNA gene	ChrX:4246565-4246722 (-)
A/J	MGP_AJ_G0038284	snRNA gene	ChrX:4123228-4123880 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0038268	snRNA gene	ChrX:4301949-4302106 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0038804	snRNA gene	ChrX:4116953-4117110 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0038096	snRNA gene	ChrX:4295200-4295357 (-)
FVB/NJ	MGP_FVBNJ_G0038044	snRNA gene	ChrX:3878041-3878198 (+)
LP/J	MGP_LPJ_G0038136	snRNA gene	ChrX:4245225-4245382 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038044	snRNA gene	ChrX:4330103-4330260 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0036774	snRNA gene	ChrX:3778892-3779049 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036537	snRNA gene	ChrX:4330054-4330211 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm25728
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15
• RefSeq
  1

• Ensembl
  ENSMUSG00000077713 (Evidence)
• NCBI Gene
  115489252

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000077713	Ensembl Gene Model | MGI Sequence Detail	159	C57BL/6J
transcript	ENSMUST00000104525	Ensembl | MGI Sequence Detail	159	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;