Gm25805 Gene Detail

Summary

• Symbol
  Gm25805
• Name
  predicted gene, 25805

• Feature Type
  snRNA gene
• IDs
  MGI:5455582
  NCBI Gene: 115488742
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:8584033-8584140 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455582	snRNA gene	Chr16:8584033-8584140 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037558	snRNA gene	Chr16:5443647-5443754 (-)
A/J	MGP_AJ_G0037554	snRNA gene	Chr16:5123695-5123802 (-)
AKR/J	MGP_AKRJ_G0037492	snRNA gene	Chr16:5401698-5401805 (-)
BALB/cJ	MGP_BALBcJ_G0037539	snRNA gene	Chr16:5295428-5295535 (-)
C3H/HeJ	MGP_C3HHeJ_G0037217	snRNA gene	Chr16:5446689-5446796 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038057	snRNA gene	Chr16:5595401-5595508 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035015	snRNA gene	Chr16:5324797-5324905 (-)
CAST/EiJ	MGP_CASTEiJ_G0036388	snRNA gene	Chr16:5464459-5464566 (-)
CBA/J	MGP_CBAJ_G0037189	snRNA gene	Chr16:5799969-5800076 (-)
DBA/2J	MGP_DBA2J_G0037368	snRNA gene	Chr16:5171133-5171240 (-)
FVB/NJ	MGP_FVBNJ_G0037313	snRNA gene	Chr16:5152731-5152838 (-)
LP/J	MGP_LPJ_G0037417	snRNA gene	Chr16:5414399-5414506 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037326	snRNA gene	Chr16:5591512-5591619 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038172	snRNA gene	Chr16:5352508-5352615 (-)
PWK/PhJ	MGP_PWKPhJ_G0036078	snRNA gene	Chr16:5343195-5343303 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0036598	snRNA gene	Chr16:5391875-5391982 (-)

Homology

• Gene Tree
  Gm25805
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000084737 (Evidence)
• NCBI Gene
  115488742

Representative Sequences			Length	Strain/Species
genomic	115488742	NCBI Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	XR_004939439	RefSeq | MGI Sequence Detail	108	C57BL/6J

References

• Summaries
  All 5

  Phenotypes 2
• Earliest
  J:152068 Friedel RH, et al., EUCOMM--the European conditional mouse mutagenesis program. Brief Funct Genomic Proteomic. 2007 Sep;6(3):180-5