Gm25828 Gene Detail

Summary

• Symbol
  Gm25828
• Name
  predicted gene, 25828

• Feature Type
  snRNA gene
• IDs
  MGI:5455605
  NCBI Gene: 115489199
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:100956236-100956330 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  76 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455605	snRNA gene	ChrX:100956236-100956338 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038331	snRNA gene	ChrX:98467961-98468055 (-)
A/J	MGP_AJ_G0038326	snRNA gene	ChrX:98442073-98442167 (-)
AKR/J	MGP_AKRJ_G0038263	snRNA gene	ChrX:101287792-101287886 (-)
BALB/cJ	MGP_BALBcJ_G0038310	snRNA gene	ChrX:97186689-97186783 (-)
C3H/HeJ	MGP_C3HHeJ_G0037976	snRNA gene	ChrX:98861348-98861442 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0038847	snRNA gene	ChrX:101387223-101387317 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0035637	snRNA gene	ChrX:96158590-96158669 (-)
CAST/EiJ	MGP_CASTEiJ_G0037120	snRNA gene	ChrX:83161135-83161229 (-)
CBA/J	MGP_CBAJ_G0037945	snRNA gene	ChrX:104536543-104536637 (-)
DBA/2J	MGP_DBA2J_G0038137	snRNA gene	ChrX:97659617-97659711 (-)
FVB/NJ	MGP_FVBNJ_G0038084	snRNA gene	ChrX:97030618-97030712 (-)
LP/J	MGP_LPJ_G0038176	snRNA gene	ChrX:99403016-99403110 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038084	snRNA gene	ChrX:109060643-109060737 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0038952	snRNA gene	ChrX:98133649-98133743 (-)
PWK/PhJ	MGP_PWKPhJ_G0036811	snRNA gene	ChrX:80755326-80755420 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0036571	snRNA gene	ChrX:84082283-84082377 (-)
WSB/EiJ	MGP_WSBEiJ_G0037348	snRNA gene	ChrX:96835337-96835431 (-)

Homology

• Gene Tree
  Gm25828
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000087712 (Evidence)
• NCBI Gene
  115489199

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087712	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00000157087	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;