Gm25867 Gene Detail

Summary

• Symbol
  Gm25867
• Name
  predicted gene, 25867

• Feature Type
  snRNA gene
• IDs
  MGI:5455644
  NCBI Gene: 115487865
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:79526137-79526239 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455644	snRNA gene	Chr11:79526137-79526239 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0037328	snRNA gene	Chr11:80749945-80750047 (-)
A/J	MGP_AJ_G0037314	snRNA gene	Chr11:77642312-77642414 (-)
AKR/J	MGP_AKRJ_G0037260	snRNA gene	Chr11:79973547-79973649 (-)
BALB/cJ	MGP_BALBcJ_G0037305	snRNA gene	Chr11:78049937-78050039 (-)
C3H/HeJ	MGP_C3HHeJ_G0036988	snRNA gene	Chr11:80030153-80030255 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0037819	snRNA gene	Chr11:83228802-83228904 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034827	snRNA gene	Chr11:74589396-74589498 (-)
CAST/EiJ	MGP_CASTEiJ_G0036166	snRNA gene	Chr11:80500287-80500389 (-)
CBA/J	MGP_CBAJ_G0036960	snRNA gene	Chr11:86849189-86849291 (-)
DBA/2J	MGP_DBA2J_G0037137	snRNA gene	Chr11:77193412-77193514 (-)
FVB/NJ	MGP_FVBNJ_G0037086	snRNA gene	Chr11:76790791-76790893 (-)
LP/J	MGP_LPJ_G0037186	snRNA gene	Chr11:81263166-81263268 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0037096	snRNA gene	Chr11:87143884-87143986 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037937	snRNA gene	Chr11:80230066-80230168 (-)
PWK/PhJ	MGP_PWKPhJ_G0035863	snRNA gene	Chr11:78011409-78011511 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0035662	snRNA gene	Chr11:79839750-79839852 (-)
WSB/EiJ	MGP_WSBEiJ_G0036377	snRNA gene	Chr11:80057711-80057813 (-)

Homology

• Gene Tree
  Gm25867
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Gm25867
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000088879 (Evidence)
• NCBI Gene
  115487865

Representative Sequences			Length	Strain/Species
genomic	115487865	NCBI Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	XR_004937314	RefSeq | MGI Sequence Detail	103	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
• Latest
  J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52