Gm25896 Gene Detail

Summary

• Symbol
  Gm25896
• Name
  predicted gene, 25896

• Feature Type
  snoRNA gene
• IDs
  MGI:5455673
  NCBI Gene: 115488692
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:87215797-87215932 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5455673	snoRNA gene	Chr16:87215797-87215932 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0038878	snoRNA gene	Chr16:88134564-88134699 (-)
A/J	MGP_AJ_G0038872	snoRNA gene	Chr16:84071404-84071539 (-)
AKR/J	MGP_AKRJ_G0038808	snoRNA gene	Chr16:86624201-86624336 (-)
BALB/cJ	MGP_BALBcJ_G0038856	snoRNA gene	Chr16:84597740-84597875 (-)
C3H/HeJ	MGP_C3HHeJ_G0038520	snoRNA gene	Chr16:87184886-87185021 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0039404	snoRNA gene	Chr16:91002095-91002230 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0036140	snoRNA gene	Chr16:81921741-81921877 (-)
CAST/EiJ	MGP_CASTEiJ_G0037661	snoRNA gene	Chr16:87564788-87564923 (-)
CBA/J	MGP_CBAJ_G0038492	snoRNA gene	Chr16:94902754-94902889 (-)
DBA/2J	MGP_DBA2J_G0038680	snoRNA gene	Chr16:83994350-83994485 (-)
FVB/NJ	MGP_FVBNJ_G0038633	snoRNA gene	Chr16:83101865-83102000 (-)
LP/J	MGP_LPJ_G0038719	snoRNA gene	Chr16:87823162-87823297 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0038632	snoRNA gene	Chr16:99456840-99456975 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0039507	snoRNA gene	Chr16:87091494-87091629 (-)
PWK/PhJ	MGP_PWKPhJ_G0037346	snoRNA gene	Chr16:84103890-84104025 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0037102	snoRNA gene	Chr16:86617644-86617779 (-)
WSB/EiJ	MGP_WSBEiJ_G0037889	snoRNA gene	Chr16:87335510-87335645 (-)

Homology

• Gene Tree
  Gm25896
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  2
• Genomic Mutations
  3 involving Gm25896
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000065647 (Evidence)
• NCBI Gene
  115488692

Representative Sequences			Length	Strain/Species
genomic	115488692	NCBI Gene Model | MGI Sequence Detail	136	C57BL/6J
transcript	XR_004939381	RefSeq | MGI Sequence Detail	136	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 6
• Earliest
  J:117029 Davisson M, et al., Impact of trisomy on fertility and meiosis in male mice. Hum Reprod. 2007 Feb;22(2):468-76
• Latest
  J:335294 Redhead Y, et al., Craniofacial dysmorphology in Down syndrome is caused by increased dosage of Dyrk1a and at least three other genes. Development. 2023 Apr 15;150(8):dev201077