Gm26535 Gene Detail

Summary

• Symbol
  Gm26535
• Name
  predicted gene, 26535

• Feature Type
  lncRNA gene
• IDs
  MGI:5477029
  NCBI Gene: 102633435
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:37213482-37255648 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1062 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477029	lncRNA gene	Chr10:37146007-37255648 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005112	lincRNA gene	Chr10:35778007-35820153 (+)
A/J	MGP_AJ_G0005095	lincRNA gene	Chr10:34839345-34881510 (+)
AKR/J	MGP_AKRJ_G0005073	lincRNA gene	Chr10:35289525-35331684 (+)
BALB/cJ	MGP_BALBcJ_G0005076	lincRNA gene	Chr10:34794474-34837522 (+)
C3H/HeJ	MGP_C3HHeJ_G0005025	lincRNA gene	Chr10:35612709-35659047 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005226	lincRNA gene	Chr10:36857516-36899692 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004632	lincRNA gene	Chr10:32920332-32962963 (+)
CAST/EiJ	MGP_CASTEiJ_G0004972	lincRNA gene	Chr10:35775144-35817223 (+)
CBA/J	MGP_CBAJ_G0005015	lincRNA gene	Chr10:38580815-38622974 (+)
DBA/2J	MGP_DBA2J_G0005034	lincRNA gene	Chr10:34398268-34440389 (+)
FVB/NJ	MGP_FVBNJ_G0005056	lincRNA gene	Chr10:33889515-33931823 (+)
LP/J	MGP_LPJ_G0005113	lincRNA gene	Chr10:35749768-35791913 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005039	lincRNA gene	Chr10:39329918-39372695 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005233	lincRNA gene	Chr10:35253086-35295231 (+)
PWK/PhJ	MGP_PWKPhJ_G0004923	lincRNA gene	Chr10:34194113-34236980 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004848	lincRNA gene	Chr10:35097308-35139722 (+)
WSB/EiJ	MGP_WSBEiJ_G0005019	lincRNA gene	Chr10:35553885-35595813 (+)

Homology

• Gene Tree
  Gm26535
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm26535
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000097742 (Evidence)
• NCBI Gene
  102633435

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097742	Ensembl Gene Model | MGI Sequence Detail	42167	C57BL/6J
transcript	ENSMUST00000181602	Ensembl | MGI Sequence Detail	2600	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87