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Gm26542 Gene Detail
Summary
  • Symbol
    Gm26542
  • Name
    predicted gene, 26542
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5477036
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:50127780-50179666 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1276 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5477036
 lncRNA gene Chr11:50127780-50179666 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005223
 lincRNA gene Chr11:49405620-49462540 (+)
A/J MGP_AJ_G0005208
 lincRNA gene Chr11:47509548-47563046 (+)
AKR/J MGP_AKRJ_G0005186
 lincRNA gene Chr11:49021439-49077819 (+)
BALB/cJ MGP_BALBcJ_G0005188
 lincRNA gene Chr11:47788912-47840938 (+)
C3H/HeJ MGP_C3HHeJ_G0005137
 lincRNA gene Chr11:49027623-49081094 (+)
C57BL/6NJ MGP_C57BL6NJ_G0005340
 lincRNA gene Chr11:50868431-50922793 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0004735
 lincRNA gene Chr11:45129467-45187067 (+)
CAST/EiJ MGP_CASTEiJ_G0005084
 lincRNA gene Chr11:48999632-49057170 (+)
CBA/J MGP_CBAJ_G0005127
 lincRNA gene Chr11:53225948-53281055 (+)
DBA/2J MGP_DBA2J_G0005144
 lincRNA gene Chr11:47308832-47360779 (+)
FVB/NJ MGP_FVBNJ_G0005169
 lincRNA gene Chr11:46936709-46990449 (+)
LP/J MGP_LPJ_G0005225
 lincRNA gene Chr11:49740527-49803976 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005152
 lincRNA gene Chr11:54755860-54809462 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0005343
 lincRNA gene Chr11:49130771-49183854 (+)
PWK/PhJ MGP_PWKPhJ_G0005035
 lincRNA gene Chr11:47712901-47766337 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004957
 lincRNA gene Chr11:48822269-48881048 (+)
WSB/EiJ MGP_WSBEiJ_G0005132
 lincRNA gene Chr11:48769663-48822158 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097887 Ensembl Gene Model | MGI Sequence Detail 51887 C57BL/6J ±  kb
transcript ENSMUST00000180443 Ensembl | MGI Sequence Detail 1235 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 7
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory