Gm26571 Gene Detail

Summary

• Symbol
  Gm26571
• Name
  predicted gene, 26571

• Feature Type
  lncRNA gene
• IDs
  MGI:5477065
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr12:83991983-83998129 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  236 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477065	lncRNA gene	Chr12:83991983-83998129 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0019920	protein coding gene	Chr12:84617260-84617925 (-)
A/J	MGP_AJ_G0019877	protein coding gene	Chr12:81411147-81411812 (-)
AKR/J	MGP_AKRJ_G0019853	protein coding gene	Chr12:83617727-83618392 (-)
BALB/cJ	MGP_BALBcJ_G0019857	protein coding gene	Chr12:81755133-81755798 (-)
C3H/HeJ	MGP_C3HHeJ_G0019663	protein coding gene	Chr12:84077231-84077896 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0020309	protein coding gene	Chr12:87036107-87036772 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017926	protein coding gene	Chr12:78334706-78335374 (-)
CAST/EiJ	MGP_CASTEiJ_G0019212	protein coding gene	Chr12:79018543-79019208 (-)
CBA/J	MGP_CBAJ_G0019634	protein coding gene	Chr12:90372523-90373188 (-)
DBA/2J	MGP_DBA2J_G0019749	protein coding gene	Chr12:80953958-80954623 (-)
FVB/NJ	MGP_FVBNJ_G0019735	protein coding gene	Chr12:79901219-79901884 (-)
LP/J	MGP_LPJ_G0019821	protein coding gene	Chr12:84491228-84491893 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0019774	protein coding gene	Chr12:93352466-93353131 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0020343	protein coding gene	Chr12:83206061-83206726 (-)
PWK/PhJ	MGP_PWKPhJ_G0018976	protein coding gene	Chr12:75435326-75435991 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0018771	protein coding gene	Chr12:77693574-77694239 (-)
WSB/EiJ	MGP_WSBEiJ_G0019264	protein coding gene	Chr12:83891080-83891745 (-)

Homology

• Gene Tree
  Gm26571
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm26571
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24

• Ensembl
  ENSMUSG00000096953 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000096953	Ensembl Gene Model | MGI Sequence Detail	6147	C57BL/6J
transcript	ENSMUST00000181399	Ensembl | MGI Sequence Detail	666	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26571:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr116975	Chr12:83998327-83998342 (-)	-206 bp