Gm26590 Gene Detail

Summary

• Symbol
  Gm26590
• Name
  predicted gene, 26590

• Feature Type
  lncRNA gene
• IDs
  MGI:5477084
  NCBI Gene: 115488381
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:52448072-52451313 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477084	lncRNA gene	Chr14:52434959-52451313 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005549	lincRNA gene	Chr14:46229792-46246382 (+)
A/J	MGP_AJ_G0005534	lincRNA gene	Chr14:45016099-45032623 (+)
AKR/J	MGP_AKRJ_G0005513	lincRNA gene	Chr14:46639725-46657965 (+)
BALB/cJ	MGP_BALBcJ_G0005516	lincRNA gene	Chr14:45123260-45139794 (+)
C3H/HeJ	MGP_C3HHeJ_G0005462	lincRNA gene	Chr14:46452027-46468667 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005672	lincRNA gene	Chr14:48281882-48298224 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005041	lincRNA gene	Chr14:44218068-44234783 (+)
CAST/EiJ	MGP_CASTEiJ_G0005406	lincRNA gene	Chr14:43424899-43441349 (+)
CBA/J	MGP_CBAJ_G0005452	lincRNA gene	Chr14:49733488-49750043 (+)
DBA/2J	MGP_DBA2J_G0005467	lincRNA gene	Chr14:44788990-44805500 (+)
FVB/NJ	MGP_FVBNJ_G0005493	lincRNA gene	Chr14:44371403-44387989 (+)
LP/J	MGP_LPJ_G0005552	lincRNA gene	Chr14:46825180-46842385 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005478	lincRNA gene	Chr14:49187292-49204647 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005671	lincRNA gene	Chr14:46027275-46043836 (+)
PWK/PhJ	MGP_PWKPhJ_G0005356	lincRNA gene	Chr14:41529192-41546128 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005274	lincRNA gene	Chr14:42062960-42079352 (+)
WSB/EiJ	MGP_WSBEiJ_G0005456	lincRNA gene	Chr14:46353918-46371228 (+)

Homology

• Gene Tree
  Gm26590
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm26590
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000097533 (Evidence)
• NCBI Gene
  115488381

Representative Sequences			Length	Strain/Species
genomic	115488381	NCBI Gene Model | MGI Sequence Detail	3242	C57BL/6J
transcript	AK146690	GenBank | ENA | DDBJ | MGI Sequence Detail	1278	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;