Gm26676 Gene Detail

Summary

• Symbol
  Gm26676
• Name
  predicted gene, 26676

• Feature Type
  lncRNA gene
• IDs
  MGI:5477170
  NCBI Gene: 102631551
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:80366550-80369820 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  204 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477170	lncRNA gene	Chr18:80366550-80369820 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003460	antisense lncRNA gene	Chr18:81241215-81244487 (+)
A/J	MGP_AJ_G0003439	antisense lncRNA gene	Chr18:77681282-77684550 (+)
AKR/J	MGP_AKRJ_G0003419	antisense lncRNA gene	Chr18:80012551-80015936 (+)
BALB/cJ	MGP_BALBcJ_G0003428	antisense lncRNA gene	Chr18:77865376-77868644 (+)
C3H/HeJ	MGP_C3HHeJ_G0003377	antisense lncRNA gene	Chr18:80093517-80096787 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003566	antisense lncRNA gene	Chr18:83327327-83330636 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003079	antisense lncRNA gene	Chr18:76534129-76537532 (+)
CAST/EiJ	MGP_CASTEiJ_G0003340	antisense lncRNA gene	Chr18:80424343-80427739 (+)
CBA/J	MGP_CBAJ_G0003374	antisense lncRNA gene	Chr18:86369366-86372636 (+)
DBA/2J	MGP_DBA2J_G0003382	antisense lncRNA gene	Chr18:77230496-77234007 (+)
FVB/NJ	MGP_FVBNJ_G0003400	antisense lncRNA gene	Chr18:76549421-76552690 (+)
LP/J	MGP_LPJ_G0003454	antisense lncRNA gene	Chr18:81108626-81111898 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003388	antisense lncRNA gene	Chr18:87615669-87618937 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003569	antisense lncRNA gene	Chr18:80150843-80154229 (+)
PWK/PhJ	MGP_PWKPhJ_G0003296	antisense lncRNA gene	Chr18:77630169-77633581 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003241	antisense lncRNA gene	Chr18:80329684-80333100 (+)
WSB/EiJ	MGP_WSBEiJ_G0003374	antisense lncRNA gene	Chr18:80102999-80106268 (+)

Homology

• Gene Tree
  Gm26676
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Transposon induced
  1
• Genomic Mutations
  1 involving Gm26676
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000097593 (Evidence)
• NCBI Gene
  102631551

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097593	Ensembl Gene Model | MGI Sequence Detail	3271	C57BL/6J
transcript	ENSMUST00000181877	Ensembl | MGI Sequence Detail	2226	Not Applicable

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:175597 Overbeek PA, Direct Data Submission for Overbeek Lentiviral Transgenic Lines. MGI Direct Data Submission. 2011;