Gm26740 Gene Detail

Summary

• Symbol
  Gm26740
• Name
  predicted gene, 26740

• Feature Type
  lncRNA gene
• IDs
  MGI:5477234
  NCBI Gene: 102637787
• Alliance
  gene page
• Transcription Start Sites
  18 TSS

Location &
Maps

• Sequence Map
  Chr10:22062184-22182281 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1918 from dbSNP Build 142
• Strain Annotations
  2

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477234	lncRNA gene	Chr10:22062113-22182328 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0002949	antisense lncRNA gene	Chr10:20552891-20705731 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm26740
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm26740
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  167
• RefSeq
  21

• Ensembl
  ENSMUSG00000097705 (Evidence)
• NCBI Gene
  102637787

Representative Sequences			Length	Strain/Species
genomic	102637787	NCBI Gene Model | MGI Sequence Detail	120098	C57BL/6J
transcript	XR_004936473	RefSeq | MGI Sequence Detail	11340	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87

TSS for Gm26740:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr97038	Chr10:22182498-22182509 (-)	-223 bp
Tssr97037	Chr10:22182454-22182485 (-)	-189 bp
Tssr97036	Chr10:22182430-22182439 (-)	-154 bp
Tssr97035	Chr10:22182322-22182330 (-)	-45 bp
Tssr97034	Chr10:22182293-22182317 (-)	-24 bp
Tssr97033	Chr10:22182266-22182282 (-)	7 bp
Tssr97032	Chr10:22179787-22179788 (-)	2,493 bp
Tssr97031	Chr10:22179753-22179765 (-)	2,522 bp
Tssr97030	Chr10:22178723-22178755 (-)	3,542 bp
Tssr97029	Chr10:22178670-22178718 (-)	3,587 bp
Tssr97028	Chr10:22178658-22178667 (-)	3,618 bp
Tssr97027	Chr10:22178458-22178472 (-)	3,816 bp
Tssr97026	Chr10:22178393-22178447 (-)	3,861 bp
Tssr97025	Chr10:22178330-22178354 (-)	3,939 bp
Tssr97024	Chr10:22177584-22177610 (-)	4,684 bp
Tssr97023	Chr10:22175698-22175714 (-)	6,575 bp
Tssr97022	Chr10:22175343-22175383 (-)	6,918 bp
Tssr97021	Chr10:22169231-22169263 (-)	13,034 bp