Gm26747 Gene Detail

Summary

• Symbol
  Gm26747
• Name
  predicted gene, 26747

• Feature Type
  lncRNA gene
• IDs
  MGI:5477241
  NCBI Gene: 102636945
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr8:122147977-122154782 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  303 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477241	lncRNA gene	Chr8:122145366-122157713 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007393	lincRNA gene	Chr8:124919444-124925370 (+)
A/J	MGP_AJ_G0007389	lincRNA gene	Chr8:119721269-119727112 (+)
AKR/J	MGP_AKRJ_G0007361	lincRNA gene	Chr8:123223718-123229560 (+)
BALB/cJ	MGP_BALBcJ_G0007367	lincRNA gene	Chr8:119937086-119942962 (+)
C3H/HeJ	MGP_C3HHeJ_G0007311	lincRNA gene	Chr8:123938286-123944129 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007538	lincRNA gene	Chr8:129060182-129066090 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006731	lincRNA gene	Chr8:112585844-112592441 (+)
CAST/EiJ	MGP_CASTEiJ_G0007214	lincRNA gene	Chr8:123970436-123976316 (+)
CBA/J	MGP_CBAJ_G0007293	lincRNA gene	Chr8:133814420-133820467 (+)
DBA/2J	MGP_DBA2J_G0007316	lincRNA gene	Chr8:118929585-118935424 (+)
FVB/NJ	MGP_FVBNJ_G0007337	lincRNA gene	Chr8:118034086-118041714 (+)
LP/J	MGP_LPJ_G0007398	lincRNA gene	Chr8:125045465-125051445 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007314	lincRNA gene	Chr8:136088032-136096496 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007541	lincRNA gene	Chr8:123398432-123404272 (+)
PWK/PhJ	MGP_PWKPhJ_G0007155	lincRNA gene	Chr8:118732654-118738645 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007062	lincRNA gene	Chr8:122113004-122121068 (+)
WSB/EiJ	MGP_WSBEiJ_G0007274	lincRNA gene	Chr8:124145839-124156965 (+)

Homology

• Gene Tree
  Gm26747
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  3

• Ensembl
  ENSMUSG00000097783 (Evidence)
• NCBI Gene
  102636945

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097783	Ensembl Gene Model | MGI Sequence Detail	6806	C57BL/6J
transcript	ENSMUST00000180597	Ensembl | MGI Sequence Detail	1716	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26747:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr79806	Chr8:122147947-122147957 (+)	-25 bp