Gm26861 Gene Detail

Summary

• Symbol
  Gm26861
• Name
  predicted gene, 26861

• Feature Type
  lncRNA gene
• IDs
  MGI:5477355
  NCBI Gene: 108168064
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:10409515-10723883 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  9330 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5477355	lncRNA gene	Chr13:10407631-10847538 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003166	antisense lncRNA gene	Chr13:7036416-7365517 (+)
A/J	MGP_AJ_G0003141	antisense lncRNA gene	Chr13:6982301-7287447 (+)
AKR/J	MGP_AKRJ_G0003122	antisense lncRNA gene	Chr13:7104364-7421334 (+)
BALB/cJ	MGP_BALBcJ_G0003129	antisense lncRNA gene	Chr13:6982882-7281192 (+)
C3H/HeJ	MGP_C3HHeJ_G0003085	antisense lncRNA gene	Chr13:7250270-7567019 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003272	antisense lncRNA gene	Chr13:7415769-7747978 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0003053	antisense lncRNA gene	Chr13:6915875-7235209 (+)
CBA/J	MGP_CBAJ_G0003081	antisense lncRNA gene	Chr13:7632155-7982331 (+)
DBA/2J	MGP_DBA2J_G0003087	antisense lncRNA gene	Chr13:6817755-7117329 (+)
FVB/NJ	MGP_FVBNJ_G0003106	antisense lncRNA gene	Chr13:6640731-6926502 (+)
LP/J	MGP_LPJ_G0003162	antisense lncRNA gene	Chr13:7125632-7462084 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003095	antisense lncRNA gene	Chr13:7897400-8244495 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003275	antisense lncRNA gene	Chr13:7021553-7330640 (+)
PWK/PhJ	MGP_PWKPhJ_G0003011	antisense lncRNA gene	Chr13:6870653-7168006 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002956	antisense lncRNA gene	Chr13:7014122-7335238 (+)
WSB/EiJ	MGP_WSBEiJ_G0003085	antisense lncRNA gene	Chr13:6955675-7274564 (+)

Homology

• Gene Tree
  Gm26861
  

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  2

• Ensembl
  ENSMUSG00000097009 (Evidence)
• NCBI Gene
  108168064

Representative Sequences			Length	Strain/Species
genomic	108168064	NCBI Gene Model | MGI Sequence Detail	314369	C57BL/6J
transcript	AK132017	GenBank | ENA | DDBJ | MGI Sequence Detail	4932	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26861:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr3991	Chr13:10631593-10631595 (+)	222,079 bp