Gm26920 Gene Detail

Summary

• Symbol
  Gm26920
• Name
  predicted gene, 26920

• Feature Type
  protein coding gene
• IDs
  MGI:5504035
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:29755459-29789835 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1462 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504035	protein coding gene	Chr7:29755459-29789835 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0031998	protein coding gene	Chr7:29009728-29052015 (-)
A/J	MGP_AJ_G0031975	protein coding gene	Chr7:28259113-28297153 (-)
AKR/J	MGP_AKRJ_G0031908	protein coding gene	Chr7:28971742-29013676 (-)
BALB/cJ	MGP_BALBcJ_G0031982	protein coding gene	Chr7:28430855-28470477 (-)
C3H/HeJ	MGP_C3HHeJ_G0031701	protein coding gene	Chr7:29427292-29463956 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0032447	protein coding gene	Chr7:29952218-29990270 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0029498	protein coding gene	Chr7:29287736-29323464 (-)
CAST/EiJ	MGP_CASTEiJ_G0031035	protein coding gene	Chr7:22657098-22695851 (-)
CBA/J	MGP_CBAJ_G0031667	protein coding gene	Chr7:31399647-31444945 (-)
DBA/2J	MGP_DBA2J_G0031819	protein coding gene	Chr7:27983952-28023380 (-)
FVB/NJ	MGP_FVBNJ_G0031776	protein coding gene	Chr7:28103564-28141368 (-)
LP/J	MGP_LPJ_G0031900	protein coding gene	Chr7:29342778-29382405 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0031812	protein coding gene	Chr7:30662779-30707844 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0032476	protein coding gene	Chr7:28457792-28503435 (-)
PWK/PhJ	MGP_PWKPhJ_G0030761	protein coding gene	Chr7:23014797-23051187 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0030594	protein coding gene	Chr7:19464411-19502207 (-)
WSB/EiJ	MGP_WSBEiJ_G0031145	protein coding gene	Chr7:28855755-28894409 (-)

Homology

• Gene Tree
  Gm26920
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000058447 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000058447	Ensembl Gene Model | MGI Sequence Detail	34377	C57BL/6J
transcript	ENSMUST00000182746	Ensembl | MGI Sequence Detail	2374	Not Applicable
polypeptide	ENSMUSP00000138567	Ensembl | MGI Sequence Detail	56	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR036051 KRAB domain superfamily
  IPR001909 Krueppel-associated box
  IPR050169 Krueppel C2H2-type zinc-finger

References

• Summaries
  All 2
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm26920:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr71687	Chr7:29789824-29789860 (-)	-7 bp