Gm27011 Gene Detail

Summary

• Symbol
  Gm27011
• Name
  predicted gene, 27011

• Feature Type
  lncRNA gene
• IDs
  MGI:5504126
  NCBI Gene: 115486886
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:122676417-122677384 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5504126	lncRNA gene	Chr8:122676413-122677384 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0004596	antisense lncRNA gene	Chr8:125475080-125476051 (-)
A/J	MGP_AJ_G0004576	antisense lncRNA gene	Chr8:120267784-120268755 (-)
AKR/J	MGP_AKRJ_G0004560	antisense lncRNA gene	Chr8:123794547-123795518 (-)
BALB/cJ	MGP_BALBcJ_G0004561	antisense lncRNA gene	Chr8:120471687-120472658 (-)
C3H/HeJ	MGP_C3HHeJ_G0004510	antisense lncRNA gene	Chr8:124485160-124486131 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0004710	antisense lncRNA gene	Chr8:129656814-129657785 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004161	antisense lncRNA gene	Chr8:113102237-113103215 (-)
CAST/EiJ	MGP_CASTEiJ_G0004468	antisense lncRNA gene	Chr8:124541644-124542615 (-)
CBA/J	MGP_CBAJ_G0004504	antisense lncRNA gene	Chr8:134444121-134445092 (-)
DBA/2J	MGP_DBA2J_G0004519	antisense lncRNA gene	Chr8:119464630-119465601 (-)
FVB/NJ	MGP_FVBNJ_G0004536	antisense lncRNA gene	Chr8:118577163-118578134 (-)
LP/J	MGP_LPJ_G0004600	antisense lncRNA gene	Chr8:125594341-125595312 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004525	antisense lncRNA gene	Chr8:136636887-136637858 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004710	antisense lncRNA gene	Chr8:123962300-123963271 (-)
PWK/PhJ	MGP_PWKPhJ_G0004421	antisense lncRNA gene	Chr8:119271230-119272201 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0004362	antisense lncRNA gene	Chr8:122673378-122674349 (-)
WSB/EiJ	MGP_WSBEiJ_G0004509	antisense lncRNA gene	Chr8:124720623-124721594 (-)

Homology

• Gene Tree
  Gm27011
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000098184 (Evidence)
• NCBI Gene
  115486886

Representative Sequences			Length	Strain/Species
genomic	115486886	NCBI Gene Model | MGI Sequence Detail	968	C57BL/6J
transcript	NR_169031	RefSeq | MGI Sequence Detail	968	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9