Gm27156 Pseudogene Detail

Summary

• Symbol
  Gm27156
• Name
  predicted gene 27156

• Feature Type
  pseudogene
• IDs
  MGI:5520999
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:76557663-76558416 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5520999	pseudogene	Chr9:76557663-76558416 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014173	pseudogene	Chr9:77044023-77044776 (+)
A/J	MGP_AJ_G0014191	pseudogene	Chr9:74350133-74350886 (+)
AKR/J	MGP_AKRJ_G0014116	pseudogene	Chr9:76118799-76119552 (+)
BALB/cJ	MGP_BALBcJ_G0014141	pseudogene	Chr9:74034156-74034909 (+)
C3H/HeJ	MGP_C3HHeJ_G0013972	pseudogene	Chr9:76604164-76604917 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014585	pseudogene	Chr9:79091360-79092113 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012419	pseudogene	Chr9:73653437-73654495 (+)
CAST/EiJ	MGP_CASTEiJ_G0013629	pseudogene	Chr9:76956382-76957135 (+)
CBA/J	MGP_CBAJ_G0013954	pseudogene	Chr9:81834120-81834873 (+)
DBA/2J	MGP_DBA2J_G0014038	pseudogene	Chr9:74022534-74023287 (+)
FVB/NJ	MGP_FVBNJ_G0014037	pseudogene	Chr9:73299334-73300087 (+)
LP/J	MGP_LPJ_G0014121	pseudogene	Chr9:77278570-77279323 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014068	pseudogene	Chr9:82974435-82975188 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014558	pseudogene	Chr9:76293067-76293820 (+)
PWK/PhJ	MGP_PWKPhJ_G0013445	pseudogene	Chr9:74275816-74276569 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013230	pseudogene	Chr9:76524414-76525168 (+)
WSB/EiJ	MGP_WSBEiJ_G0013688	pseudogene	Chr9:76222996-76223749 (+)

Homology

• Gene Tree
  Gm27156
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm27156
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000098335 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098335	Ensembl Gene Model | MGI Sequence Detail	754	C57BL/6J
transcript	ENSMUST00000184589	Ensembl | MGI Sequence Detail	754	Not Applicable

References

• Summaries
  All 9

  Phenotypes 7
• Earliest
  J:12013 Russell LB, Definition of functional units in a small chromosomal segment of the mouse and its use in interpreting the nature of radiation-induced mutations. Mutat Res. 1971 Jan;11(1):107-23
• Latest
  J:29898 Avraham KB, et al., The mouse Snell's waltzer deafness gene encodes an unconventional myosin required for structural integrity of inner ear hair cells. Nat Genet. 1995 Dec;11(4):369-75