Gm27167 Gene Detail

Summary

• Symbol
  Gm27167
• Name
  predicted gene 27167

• Feature Type
  lncRNA gene
• IDs
  MGI:5521010
  NCBI Gene: 102636870
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:87629081-87646050 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic

Strain
Comparison

• SNPs within 2kb
  732 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5521010	lncRNA gene	Chr8:87629081-87646050 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007349	lincRNA gene	Chr8:87887277-87903524 (+)
A/J	MGP_AJ_G0007346	lincRNA gene	Chr8:84439329-84456276 (+)
AKR/J	MGP_AKRJ_G0007318	lincRNA gene	Chr8:86939634-86958394 (+)
BALB/cJ	MGP_BALBcJ_G0007324	lincRNA gene	Chr8:84590854-84621800 (+)
C3H/HeJ	MGP_C3HHeJ_G0007268	lincRNA gene	Chr8:87553824-87570778 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007495	lincRNA gene	Chr8:91272497-91289012 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006689	lincRNA gene	Chr8:78468257-78485085 (+)
CAST/EiJ	MGP_CASTEiJ_G0007170	lincRNA gene	Chr8:86966721-86983068 (+)
CBA/J	MGP_CBAJ_G0007250	lincRNA gene	Chr8:94349285-94366533 (+)
DBA/2J	MGP_DBA2J_G0007273	lincRNA gene	Chr8:84052358-84069361 (+)
FVB/NJ	MGP_FVBNJ_G0007294	lincRNA gene	Chr8:83002316-83023632 (+)
LP/J	MGP_LPJ_G0007354	lincRNA gene	Chr8:88017427-88036179 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007270	lincRNA gene	Chr8:96864618-96882462 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007497	lincRNA gene	Chr8:86935695-86953033 (+)
PWK/PhJ	MGP_PWKPhJ_G0007112	lincRNA gene	Chr8:83299717-83316661 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007019	lincRNA gene	Chr8:85697445-85714407 (+)
WSB/EiJ	MGP_WSBEiJ_G0007230	lincRNA gene	Chr8:87362290-87382155 (+)

Homology

• Gene Tree
  Gm27167
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  30 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm27167
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000098534 (Evidence)
• NCBI Gene
  102636870

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098534	Ensembl Gene Model | MGI Sequence Detail	16970	C57BL/6J
transcript	ENSMUST00000183752	Ensembl | MGI Sequence Detail	511	Not Applicable

References

• Summaries
  All 33

  Phenotypes 30
• Earliest
  J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
• Latest
  J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12