Gm27207 Gene Detail

Summary

• Symbol
  Gm27207
• Name
  predicted gene 27207

• Feature Type
  lncRNA gene
• IDs
  MGI:5521050
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:88081129-88099703 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic

Strain
Comparison

• SNPs within 2kb
  617 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5521050	lncRNA gene	Chr8:88081129-88099703 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007355	lincRNA gene	Chr8:88359675-88378199 (-)
A/J	MGP_AJ_G0007352	lincRNA gene	Chr8:84891110-84909641 (-)
AKR/J	MGP_AKRJ_G0007324	lincRNA gene	Chr8:87400936-87421574 (-)
BALB/cJ	MGP_BALBcJ_G0007330	lincRNA gene	Chr8:85060516-85079040 (-)
C3H/HeJ	MGP_C3HHeJ_G0007274	lincRNA gene	Chr8:88001755-88020300 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007501	lincRNA gene	Chr8:91719714-91738262 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006694	lincRNA gene	Chr8:78899000-78918345 (-)
CAST/EiJ	MGP_CASTEiJ_G0007176	lincRNA gene	Chr8:87411603-87435790 (-)
CBA/J	MGP_CBAJ_G0007256	lincRNA gene	Chr8:94833549-94852118 (-)
DBA/2J	MGP_DBA2J_G0007279	lincRNA gene	Chr8:84497285-84515830 (-)
FVB/NJ	MGP_FVBNJ_G0007300	lincRNA gene	Chr8:83454188-83472741 (-)
LP/J	MGP_LPJ_G0007360	lincRNA gene	Chr8:88493572-88512112 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007276	lincRNA gene	Chr8:97339671-97358215 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007503	lincRNA gene	Chr8:87407574-87426098 (-)
PWK/PhJ	MGP_PWKPhJ_G0007118	lincRNA gene	Chr8:83752311-83770889 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007025	lincRNA gene	Chr8:86184374-86202905 (-)
WSB/EiJ	MGP_WSBEiJ_G0007236	lincRNA gene	Chr8:87836126-87854669 (-)

Homology

• Gene Tree
  Gm27207
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000098768 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098768	Ensembl Gene Model | MGI Sequence Detail	18575	C57BL/6J
transcript	ENSMUST00000184995	Ensembl | MGI Sequence Detail	878	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;