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Gm27216 Gene Detail
Summary
  • Symbol
    Gm27216
  • Name
    predicted gene 27216
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5521059
    NCBI Gene: 105243469
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:83122532-83136562 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    566 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5521059
 lncRNA gene Chr9:83122525-83136631 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007469
 lincRNA gene Chr9:83902700-83916575 (-)
A/J MGP_AJ_G0007464
 lincRNA gene Chr9:80989822-81004012 (-)
AKR/J MGP_AKRJ_G0007437
 lincRNA gene Chr9:82883577-82897863 (-)
BALB/cJ MGP_BALBcJ_G0007442
 lincRNA gene Chr9:80644509-80658390 (-)
C3H/HeJ MGP_C3HHeJ_G0007386
 lincRNA gene Chr9:83413928-83428557 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007614
 lincRNA gene Chr9:86208429-86226462 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006800
 lincRNA gene Chr9:79928789-79942018 (-)
CAST/EiJ MGP_CASTEiJ_G0007290
 lincRNA gene Chr9:83812225-83828561 (-)
CBA/J MGP_CBAJ_G0007368
 lincRNA gene Chr9:89256662-89273530 (-)
DBA/2J MGP_DBA2J_G0007392
 lincRNA gene Chr9:80593069-80607402 (-)
FVB/NJ MGP_FVBNJ_G0007410
 lincRNA gene Chr9:79730555-79744566 (-)
LP/J MGP_LPJ_G0007474
 lincRNA gene Chr9:84104633-84118776 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0007390
 lincRNA gene Chr9:90678456-90692847 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007616
 lincRNA gene Chr9:83062872-83078229 (-)
PWK/PhJ MGP_PWKPhJ_G0007230
 lincRNA gene Chr9:80740522-80755416 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007135
 lincRNA gene Chr9:83220158-83233997 (-)
WSB/EiJ MGP_WSBEiJ_G0007350
 lincRNA gene Chr9:83040796-83056120 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    34
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 105243469 NCBI Gene Model | MGI Sequence Detail 14031 C57BL/6J ±  kb
transcript NR_166683 RefSeq | MGI Sequence Detail 616 ZRU/MplStud  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory