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Gm27246 Gene Detail
Summary
  • Symbol
    Gm27246
  • Name
    predicted gene 27246
  • Synonyms
    Gm39216
  • Feature Type
    lncRNA gene
  • IDs
    MGI:5521089
    NCBI Gene: 102637261
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:87841273-87925032 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 8, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2408 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5521089
lncRNA gene Chr8:87828348-87925037 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007352
lincRNA gene Chr8:88110975-88201889 (+)
A/J MGP_AJ_G0007349
lincRNA gene Chr8:84648340-84732922 (+)
AKR/J MGP_AKRJ_G0007321
lincRNA gene Chr8:87157450-87245014 (+)
BALB/cJ MGP_BALBcJ_G0007327
lincRNA gene Chr8:84818071-84903501 (+)
C3H/HeJ MGP_C3HHeJ_G0007271
lincRNA gene Chr8:87755927-87843504 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007498
lincRNA gene Chr8:91479689-91564555 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006691
lincRNA gene Chr8:78663551-78747754 (+)
CAST/EiJ MGP_CASTEiJ_G0007173
lincRNA gene Chr8:87168313-87254060 (+)
CBA/J MGP_CBAJ_G0007253
lincRNA gene Chr8:94575687-94668996 (+)
DBA/2J MGP_DBA2J_G0007276
lincRNA gene Chr8:84255981-84340746 (+)
FVB/NJ MGP_FVBNJ_G0007297
lincRNA gene Chr8:83213825-83297706 (+)
LP/J MGP_LPJ_G0007357
lincRNA gene Chr8:88230165-88318912 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007273
lincRNA gene Chr8:97085602-97176334 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007500
lincRNA gene Chr8:87153759-87249151 (+)
PWK/PhJ MGP_PWKPhJ_G0007115
lincRNA gene Chr8:83504390-83590351 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007022
lincRNA gene Chr8:85935784-86024721 (+)
WSB/EiJ MGP_WSBEiJ_G0007233
lincRNA gene Chr8:87585551-87675400 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    30 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000098684 Ensembl Gene Model | MGI Sequence Detail 83760 C57BL/6J ±  kb
transcript ENSMUST00000183611 Ensembl | MGI Sequence Detail 1240 Not Applicable  
For the selected sequence
Other
Accession IDs
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MGI:5622101
References
more
  • Summaries
    All 35
    Phenotypes 30
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
  • Latest
    J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
11/12/2024
MGI 6.24
The Jackson Laboratory