Mir6904 Gene Detail

Summary

• Symbol
  Mir6904
• Name
  microRNA 6904
• Synonyms
  mmu-mir-6904

• Feature Type
  miRNA gene
• IDs
  MGI:5530808
  NCBI Gene: 102466761
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:180414766-180414832 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  125 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5530808	miRNA gene	Chr1:180414766-180414832 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007687	miRNA gene	Chr1:187021902-187021968 (+)
A/J	MGP_AJ_G0007682	miRNA gene	Chr1:179465991-179466057 (+)
AKR/J	MGP_AKRJ_G0007655	miRNA gene	Chr1:184803708-184803774 (+)
BALB/cJ	MGP_BALBcJ_G0007658	miRNA gene	Chr1:180090588-180090654 (+)
C3H/HeJ	MGP_C3HHeJ_G0007604	miRNA gene	Chr1:185566042-185566108 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007833	miRNA gene	Chr1:193046843-193046909 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006995	miRNA gene	Chr1:170455089-170455155 (+)
CAST/EiJ	MGP_CASTEiJ_G0007502	miRNA gene	Chr1:184908688-184908754 (+)
CBA/J	MGP_CBAJ_G0007578	miRNA gene	Chr1:200231042-200231108 (+)
DBA/2J	MGP_DBA2J_G0007612	miRNA gene	Chr1:178308280-178308346 (+)
FVB/NJ	MGP_FVBNJ_G0007627	miRNA gene	Chr1:176399620-176399686 (+)
LP/J	MGP_LPJ_G0007691	miRNA gene	Chr1:188286771-188286837 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007601	miRNA gene	Chr1:207407647-207407713 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007834	miRNA gene	Chr1:184577356-184577422 (+)
PWK/PhJ	MGP_PWKPhJ_G0007435	miRNA gene	Chr1:177397143-177397209 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007333	miRNA gene	Chr1:183520411-183520477 (+)
WSB/EiJ	MGP_WSBEiJ_G0007567	miRNA gene	Chr1:184782173-184782239 (+)

Homology

• Gene Tree
  Mir6904
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving Mir6904
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098926 (Evidence)
• NCBI Gene
  102466761

Representative Sequences			Length	Strain/Species
genomic	102466761	NCBI Gene Model | MGI Sequence Detail	67	C57BL/6J
transcript	NR_105869	RefSeq | MGI Sequence Detail	67	ZRU/MplStud

Other Database
Links

miRBase

MI0022751

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4