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Mir6539 Gene Detail
Summary
  • Symbol
    Mir6539
  • Name
    microRNA 6539
  • Synonyms
    mmu-mir-6539
Location &
Maps
more
  • Sequence Map
    Chr14:68097085-68097194 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_5530846
 miRNA gene Chr14:68097085-68097194 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008136
 miRNA gene Chr14:62607622-62607731 (-)
A/J MGP_AJ_G0008123
 miRNA gene Chr14:61103935-61104044 (-)
AKR/J MGP_AKRJ_G0008101
 miRNA gene Chr14:63186371-63186480 (-)
BALB/cJ MGP_BALBcJ_G0008105
 miRNA gene Chr14:61098993-61099102 (-)
C3H/HeJ MGP_C3HHeJ_G0008049
 miRNA gene Chr14:62917133-62917242 (-)
C57BL/6NJ MGP_C57BL6NJ_G0008295
 miRNA gene Chr14:65445935-65446044 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0007385
 miRNA gene Chr14:59011332-59011441 (-)
CAST/EiJ MGP_CASTEiJ_G0007927
 miRNA gene Chr14:59417871-59417980 (-)
CBA/J MGP_CBAJ_G0008017
 miRNA gene Chr14:67456433-67456542 (-)
DBA/2J MGP_DBA2J_G0008053
 miRNA gene Chr14:60737447-60737556 (-)
FVB/NJ MGP_FVBNJ_G0008076
 miRNA gene Chr14:60144956-60145065 (-)
LP/J MGP_LPJ_G0008136
 miRNA gene Chr14:63663025-63663134 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008045
 miRNA gene Chr14:66432181-66432290 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0008291
 miRNA gene Chr14:62418585-62418694 (-)
PWK/PhJ MGP_PWKPhJ_G0007848
 miRNA gene Chr14:57504576-57504685 (-)
SPRET/EiJ MGP_SPRETEiJ_G0007744
 miRNA gene Chr14:58358687-58358796 (-)
WSB/EiJ MGP_WSBEiJ_G0008004
 miRNA gene Chr14:62746344-62746453 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 102465310 NCBI Gene Model | MGI Sequence Detail 110 C57BL/6J ±  kb
transcript NR_105857 RefSeq | MGI Sequence Detail 110 ZRU/MplStud  
For the selected sequence
Other Database
Links
less
miRBase MI0022355
References
more
  • Summaries
    All 7
    Phenotypes 2
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:357102 Kuchen S, et al., Regulation of microRNA expression and abundance during lymphopoiesis. Immunity. 2010 Jun 25;32(6):828-39
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory