Mir6897 Gene Detail

Summary

• Symbol
  Mir6897
• Name
  microRNA 6897
• Synonyms
  mmu-mir-6897

• Feature Type
  miRNA gene
• IDs
  MGI:5531034
  NCBI Gene: 102465540
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:36183333-36183394 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531034	miRNA gene	Chr1:36183333-36183394 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0007606	miRNA gene	Chr1:34647157-34647218 (-)
A/J	MGP_AJ_G0007601	miRNA gene	Chr1:33729319-33729380 (-)
AKR/J	MGP_AKRJ_G0007575	miRNA gene	Chr1:34213560-34213621 (-)
BALB/cJ	MGP_BALBcJ_G0007577	miRNA gene	Chr1:33425906-33425967 (-)
C3H/HeJ	MGP_C3HHeJ_G0007524	miRNA gene	Chr1:34399240-34399301 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0007752	miRNA gene	Chr1:36228325-36228386 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006927	miRNA gene	Chr1:30792688-30792750 (-)
CAST/EiJ	MGP_CASTEiJ_G0007424	miRNA gene	Chr1:34282836-34282895 (-)
CBA/J	MGP_CBAJ_G0007499	miRNA gene	Chr1:37162964-37163025 (-)
DBA/2J	MGP_DBA2J_G0007532	miRNA gene	Chr1:33070324-33070385 (-)
FVB/NJ	MGP_FVBNJ_G0007547	miRNA gene	Chr1:32587864-32587925 (-)
LP/J	MGP_LPJ_G0007614	miRNA gene	Chr1:35019554-35019615 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007522	miRNA gene	Chr1:39415367-39415428 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007753	miRNA gene	Chr1:34212734-34212795 (-)
PWK/PhJ	MGP_PWKPhJ_G0007357	miRNA gene	Chr1:32811746-32811807 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007261	miRNA gene	Chr1:34190639-34190701 (-)
WSB/EiJ	MGP_WSBEiJ_G0007488	miRNA gene	Chr1:34187064-34187125 (-)

Homology

• Gene Tree
  Mir6897
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir6897
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098752 (Evidence)
• NCBI Gene
  102465540

Representative Sequences			Length	Strain/Species
genomic	102465540	NCBI Gene Model | MGI Sequence Detail	62	C57BL/6J
transcript	NR_105862	RefSeq | MGI Sequence Detail	62	ZRU/MplStud

Other Database
Links

miRBase

MI0022744

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4