Mir6968 Gene Detail

Summary

• Symbol
  Mir6968
• Name
  microRNA 6968
• Synonyms
  mmu-mir-6968

• Feature Type
  miRNA gene
• IDs
  MGI:5531048
  NCBI Gene: 102465584
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:27154446-27154513 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531048	miRNA gene	Chr17:27154446-27154513 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008321	miRNA gene	Chr17:26159909-26159976 (+)
A/J	MGP_AJ_G0008306	miRNA gene	Chr17:25365475-25365542 (+)
AKR/J	MGP_AKRJ_G0008290	miRNA gene	Chr17:25499066-25499133 (+)
BALB/cJ	MGP_BALBcJ_G0008291	miRNA gene	Chr17:25607496-25607563 (+)
C3H/HeJ	MGP_C3HHeJ_G0008233	miRNA gene	Chr17:25874455-25874522 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008489	miRNA gene	Chr17:27265799-27265866 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007542	miRNA gene	Chr17:22776787-22776853 (+)
CAST/EiJ	MGP_CASTEiJ_G0008102	miRNA gene	Chr17:25801805-25801872 (+)
CBA/J	MGP_CBAJ_G0008203	miRNA gene	Chr17:28217759-28217826 (+)
DBA/2J	MGP_DBA2J_G0008234	miRNA gene	Chr17:24927855-24927922 (+)
FVB/NJ	MGP_FVBNJ_G0008259	miRNA gene	Chr17:24711951-24712018 (+)
LP/J	MGP_LPJ_G0008319	miRNA gene	Chr17:26409843-26409910 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008223	miRNA gene	Chr17:27732807-27732874 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008479	miRNA gene	Chr17:25872328-25872395 (+)
PWK/PhJ	MGP_PWKPhJ_G0008023	miRNA gene	Chr17:23726658-23726725 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007910	miRNA gene	Chr17:23908809-23908877 (+)
WSB/EiJ	MGP_WSBEiJ_G0008181	miRNA gene	Chr17:25894893-25894960 (+)

Homology

• Gene Tree
  Mir6968
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Radiation induced
  2
• Genomic Mutations
  2 involving Mir6968
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000098510 (Evidence)
• NCBI Gene
  102465584

Representative Sequences			Length	Strain/Species
genomic	102465584	NCBI Gene Model | MGI Sequence Detail	68	C57BL/6J
transcript	NR_105934	RefSeq | MGI Sequence Detail	68	ZRU/MplStud

Other Database
Links

miRBase

MI0022816

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:86784 Bergstrom DE, et al., Overlapping deletions spanning the proximal two-thirds of the mouse t complex. Mamm Genome. 2003 Dec;14(12):817-29
• Latest
  J:194116 Flachs P, et al., Interallelic and intergenic incompatibilities of the Prdm9 (Hst1) gene in mouse hybrid sterility. PLoS Genet. 2012;8(11):e1003044