Mir6905 Gene Detail

Summary

• Symbol
  Mir6905
• Name
  microRNA 6905
• Synonyms
  mmu-mir-6905

• Feature Type
  miRNA gene
• IDs
  MGI:5531261
  NCBI Gene: 102465545
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:24786562-24786631 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  164 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5531261	miRNA gene	Chr10:24786562-24786631 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007701	miRNA gene	Chr10:22908632-22908701 (+)
A/J	MGP_AJ_G0007697	miRNA gene	Chr10:22232200-22232269 (+)
AKR/J	MGP_AKRJ_G0007670	miRNA gene	Chr10:22608033-22608102 (+)
BALB/cJ	MGP_BALBcJ_G0007673	miRNA gene	Chr10:22330071-22330140 (+)
C3H/HeJ	MGP_C3HHeJ_G0007619	miRNA gene	Chr10:22816517-22816586 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007849	miRNA gene	Chr10:23613027-23613096 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007009	miRNA gene	Chr10:20923993-20924067 (+)
CAST/EiJ	MGP_CASTEiJ_G0007516	miRNA gene	Chr10:22749526-22749595 (+)
CBA/J	MGP_CBAJ_G0007593	miRNA gene	Chr10:24685750-24685819 (+)
DBA/2J	MGP_DBA2J_G0007626	miRNA gene	Chr10:21962676-21962745 (+)
FVB/NJ	MGP_FVBNJ_G0007642	miRNA gene	Chr10:21662404-21662473 (+)
LP/J	MGP_LPJ_G0007706	miRNA gene	Chr10:22901466-22901535 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007616	miRNA gene	Chr10:24794861-24794930 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007848	miRNA gene	Chr10:22460597-22460666 (+)
PWK/PhJ	MGP_PWKPhJ_G0007449	miRNA gene	Chr10:21750088-21750157 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007347	miRNA gene	Chr10:22296507-22296581 (+)
WSB/EiJ	MGP_WSBEiJ_G0007581	miRNA gene	Chr10:22592991-22593060 (+)

Homology

• Gene Tree
  Mir6905
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir6905
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000099181 (Evidence)
• NCBI Gene
  102465545

Representative Sequences			Length	Strain/Species
genomic	102465545	NCBI Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	NR_105870	RefSeq | MGI Sequence Detail	70	ZRU/MplStud

Other Database
Links

miRBase

MI0022752

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4