Gm28051 Gene Detail

Summary

• Symbol
  Gm28051
• Name
  predicted gene, 28051

• Feature Type
  protein coding gene
• IDs
  MGI:5547787
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr12:102686234-102724024 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  928 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5547787	protein coding gene	Chr12:102686234-102724024 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0020035	protein coding gene	Chr12:104375342-104416280 (-)
A/J	MGP_AJ_G0019991	protein coding gene	Chr12:100359679-100397149 (-)
AKR/J	MGP_AKRJ_G0019967	protein coding gene	Chr12:103201136-103238901 (-)
BALB/cJ	MGP_BALBcJ_G0019977	protein coding gene	Chr12:100711242-100749506 (-)
C3H/HeJ	MGP_C3HHeJ_G0019779	protein coding gene	Chr12:103670622-103713265 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0020426	protein coding gene	Chr12:107611488-107654924 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0018039	protein coding gene	Chr12:97372493-97409085 (-)
CAST/EiJ	MGP_CASTEiJ_G0019325	protein coding gene	Chr12:98516453-98556505 (-)
CBA/J	MGP_CBAJ_G0019751	protein coding gene	Chr12:111613399-111658816 (-)
DBA/2J	MGP_DBA2J_G0019862	protein coding gene	Chr12:99876911-99915058 (-)
FVB/NJ	MGP_FVBNJ_G0019851	protein coding gene	Chr12:98609370-98647151 (-)
LP/J	MGP_LPJ_G0019938	protein coding gene	Chr12:104215247-104255998 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0019891	protein coding gene	Chr12:115074323-115116515 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0020455	protein coding gene	Chr12:102714437-102753325 (-)
PWK/PhJ	MGP_PWKPhJ_G0019088	protein coding gene	Chr12:94434757-94473452 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0018884	protein coding gene	Chr12:96904373-96954564 (-)
WSB/EiJ	MGP_WSBEiJ_G0019379	protein coding gene	Chr12:103603953-103647834 (-)

Homology

• Gene Tree
  Gm28051
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  13
• Chemically induced (other)
  1
• Gene trapped
  12
• Genomic Mutations
  1 involving Gm28051
• Find Mice (IMSR)
  3 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000098530 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000098530	Ensembl Gene Model | MGI Sequence Detail	37791	C57BL/6J
transcript	ENSMUST00000179306	Ensembl | MGI Sequence Detail	445	Not Applicable
polypeptide	ENSMUSP00000136193	Ensembl | MGI Sequence Detail	81	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR027893 EKC/KEOPS complex subunit GON7, metazoa

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;

TSS for Gm28051:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr117445	Chr12:102724009-102724018 (-)	10 bp
Tssr117444	Chr12:102723949-102723954 (-)	72 bp
Tssr117442	Chr12:102696673-102696687 (-)	27,344 bp