Mir6920 Gene Detail

Summary

• Symbol
  Mir6920
• Name
  microRNA 6920
• Synonyms
  mmu-mir-6920

• Feature Type
  miRNA gene
• IDs
  MGI:5562731
  NCBI Gene: 102465554
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:53300024-53300094 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  73 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5562731	miRNA gene	Chr11:53300024-53300094 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007807	miRNA gene	Chr11:52790609-52790679 (+)
A/J	MGP_AJ_G0007803	miRNA gene	Chr11:50809689-50809759 (+)
AKR/J	MGP_AKRJ_G0007777	miRNA gene	Chr11:52465421-52465491 (+)
BALB/cJ	MGP_BALBcJ_G0007780	miRNA gene	Chr11:51167843-51167913 (+)
C3H/HeJ	MGP_C3HHeJ_G0007727	miRNA gene	Chr11:52437722-52437792 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007958	miRNA gene	Chr11:54385129-54385199 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007102	miRNA gene	Chr11:48348118-48348184 (+)
CAST/EiJ	MGP_CASTEiJ_G0007620	miRNA gene	Chr11:52482641-52482711 (+)
CBA/J	MGP_CBAJ_G0007698	miRNA gene	Chr11:56955462-56955532 (+)
DBA/2J	MGP_DBA2J_G0007734	miRNA gene	Chr11:50558842-50558912 (+)
FVB/NJ	MGP_FVBNJ_G0007751	miRNA gene	Chr11:50197185-50197255 (+)
LP/J	MGP_LPJ_G0007811	miRNA gene	Chr11:53244192-53244262 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007721	miRNA gene	Chr11:58283695-58283765 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007956	miRNA gene	Chr11:52495575-52495645 (+)
PWK/PhJ	MGP_PWKPhJ_G0007549	miRNA gene	Chr11:51072547-51072617 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007445	miRNA gene	Chr11:52315644-52315714 (+)
WSB/EiJ	MGP_WSBEiJ_G0007688	miRNA gene	Chr11:52137209-52137279 (+)

Homology

• Gene Tree
  Mir6920
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mir6920
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105908 (Evidence)
• NCBI Gene
  102465554

Representative Sequences			Length	Strain/Species
genomic	102465554	NCBI Gene Model | MGI Sequence Detail	71	C57BL/6J
transcript	NR_105885	RefSeq | MGI Sequence Detail	71	ZRU/MplStud

Other Database
Links

miRBase

MI0022767

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4