Mir1291 Gene Detail

Summary

• Symbol
  Mir1291
• Name
  microRNA 1291
• Synonyms
  mmu-mir-1291

• Feature Type
  miRNA gene
• IDs
  MGI:5562744
  NCBI Gene: 102466255
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:98417643-98417759 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  122 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5562744	miRNA gene	Chr15:98417643-98417759 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0008223	miRNA gene	Chr15:100250856-100250972 (-)
A/J	MGP_AJ_G0008211	miRNA gene	Chr15:96296568-96296684 (-)
AKR/J	MGP_AKRJ_G0008194	miRNA gene	Chr15:99246582-99246698 (-)
BALB/cJ	MGP_BALBcJ_G0008196	miRNA gene	Chr15:96494296-96494412 (-)
C3H/HeJ	MGP_C3HHeJ_G0008138	miRNA gene	Chr15:99297469-99297585 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0008388	miRNA gene	Chr15:103963106-103963222 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007458	miRNA gene	Chr15:92213035-92213149 (-)
CAST/EiJ	MGP_CASTEiJ_G0008009	miRNA gene	Chr15:100158148-100158263 (-)
CBA/J	MGP_CBAJ_G0008107	miRNA gene	Chr15:107491961-107492077 (-)
DBA/2J	MGP_DBA2J_G0008140	miRNA gene	Chr15:95744515-95744631 (-)
FVB/NJ	MGP_FVBNJ_G0008164	miRNA gene	Chr15:94716365-94716481 (-)
LP/J	MGP_LPJ_G0008223	miRNA gene	Chr15:100406482-100406598 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008128	miRNA gene	Chr15:111517618-111517734 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008380	miRNA gene	Chr15:99342212-99342328 (-)
PWK/PhJ	MGP_PWKPhJ_G0007931	miRNA gene	Chr15:95859108-95859224 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007822	miRNA gene	Chr15:99179328-99179442 (-)
WSB/EiJ	MGP_WSBEiJ_G0008087	miRNA gene	Chr15:99873260-99873376 (-)

Homology

• Human Ortholog
  MIR1291, microRNA 1291

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MIR1291, microRNA 1291
  
• Synonyms
  hsa-mir-1291, mir-1291, MIRN1291
• Links
  HGNC:35284

  NCBI Gene ID: 100302221

  
  
• Chr Location
  chr12:48654444-48654530 (-)  GRCh38

---

• MGI Vertebrate Homology
  Mir1291 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: MIR1291
• Gene Tree
  Mir1291
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  20 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Mir1291
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000106463 (Evidence)
• NCBI Gene
  102466255

Representative Sequences			Length	Strain/Species
genomic	102466255	NCBI Gene Model | MGI Sequence Detail	117	C57BL/6J
transcript	NR_106171	RefSeq | MGI Sequence Detail	117	ZRU/MplStud

Other Database
Links

miRBase

MI0026023

References

• Summaries
  All 24

  Diseases 1

  Phenotypes 20
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27