Mir219c Gene Detail

Summary

• Symbol
  Mir219c
• Name
  microRNA 219c
• Synonyms
  mmu-mir-219c

• Feature Type
  miRNA gene
• IDs
  MGI:5562750
  NCBI Gene: 102466848
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:34243986-34244045 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5562750	miRNA gene	Chr17:34243986-34244045 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0008334	miRNA gene	Chr17:33994451-33994510 (+)
A/J	MGP_AJ_G0008320	miRNA gene	Chr17:32817147-32817206 (+)
AKR/J	MGP_AKRJ_G0008304	miRNA gene	Chr17:33231264-33231323 (+)
BALB/cJ	MGP_BALBcJ_G0008305	miRNA gene	Chr17:32989947-32990006 (+)
C3H/HeJ	MGP_C3HHeJ_G0008247	miRNA gene	Chr17:33585737-33585796 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0008502	miRNA gene	Chr17:35295930-35295989 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007554	miRNA gene	Chr17:30354623-30354682 (+)
CAST/EiJ	MGP_CASTEiJ_G0008115	miRNA gene	Chr17:33685122-33685181 (+)
CBA/J	MGP_CBAJ_G0008217	miRNA gene	Chr17:36693836-36693895 (+)
DBA/2J	MGP_DBA2J_G0008248	miRNA gene	Chr17:32198054-32198113 (+)
FVB/NJ	MGP_FVBNJ_G0008273	miRNA gene	Chr17:32067304-32067361 (+)
LP/J	MGP_LPJ_G0008333	miRNA gene	Chr17:34277343-34277402 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0008236	miRNA gene	Chr17:35740561-35740620 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008492	miRNA gene	Chr17:33572892-33572951 (+)
PWK/PhJ	MGP_PWKPhJ_G0008035	miRNA gene	Chr17:31126569-31126628 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007922	miRNA gene	Chr17:31524516-31524575 (+)
WSB/EiJ	MGP_WSBEiJ_G0008195	miRNA gene	Chr17:33586085-33586144 (+)

Homology

• Gene Tree
  Mir219c
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Mir219c
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105964 (Evidence)
• NCBI Gene
  102466848

Representative Sequences			Length	Strain/Species
genomic	102466848	NCBI Gene Model | MGI Sequence Detail	60	C57BL/6J
transcript	NR_106154	RefSeq | MGI Sequence Detail	60	ZRU/MplStud

Other Database
Links

miRBase

MI0025034

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:36910 You Y, et al., Chromosomal deletion complexes in mice by radiation of embryonic stem cells. Nat Genet. 1997 Mar;15(3):285-8
• Latest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9