Gm28155 Pseudogene Detail

Summary

• Symbol
  Gm28155
• Name
  predicted gene 28155

• Feature Type
  pseudogene
• IDs
  MGI:5578861
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:9190767-9190917 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5578861	pseudogene	Chr13:9190767-9190917 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010967	pseudogene	Chr13:5780593-5780743 (-)
A/J	MGP_AJ_G0010971	pseudogene	Chr13:5764012-5764162 (-)
AKR/J	MGP_AKRJ_G0010924	pseudogene	Chr13:5833341-5833491 (-)
BALB/cJ	MGP_BALBcJ_G0010944	pseudogene	Chr13:5772129-5772279 (-)
C3H/HeJ	MGP_C3HHeJ_G0010844	pseudogene	Chr13:5952423-5952573 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011227	pseudogene	Chr13:6135570-6135720 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009819	pseudogene	Chr13:5712390-5712541 (-)
CAST/EiJ	MGP_CASTEiJ_G0010669	pseudogene	Chr13:5673682-5673832 (-)
CBA/J	MGP_CBAJ_G0010816	pseudogene	Chr13:6269282-6269432 (-)
DBA/2J	MGP_DBA2J_G0010863	pseudogene	Chr13:5593901-5594051 (-)
FVB/NJ	MGP_FVBNJ_G0010875	pseudogene	Chr13:5450202-5450352 (-)
LP/J	MGP_LPJ_G0010949	pseudogene	Chr13:5881457-5881607 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010860	pseudogene	Chr13:6608763-6608913 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011206	pseudogene	Chr13:5796627-5796777 (-)
PWK/PhJ	MGP_PWKPhJ_G0010553	pseudogene	Chr13:5628277-5628427 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010374	pseudogene	Chr13:5783600-5783750 (-)
WSB/EiJ	MGP_WSBEiJ_G0010717	pseudogene	Chr13:5695580-5695730 (-)

Homology

• Gene Tree
  Gm28155
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000099428 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099428	Ensembl Gene Model | MGI Sequence Detail	151	C57BL/6J
transcript	ENSMUST00000191066	Ensembl | MGI Sequence Detail	151	Not Applicable

References

• Summaries
  All 3

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;