Gm28214 Gene Detail

Summary

• Symbol
  Gm28214
• Name
  predicted gene 28214

• Feature Type
  lncRNA gene
• IDs
  MGI:5578920
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:137040903-137041652 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, Syntenic

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5578920	lncRNA gene	Chr2:137040903-137041652 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0006025	lincRNA gene	Chr2:140994686-140995435 (+)
A/J	MGP_AJ_G0006018	lincRNA gene	Chr2:135276304-135277053 (+)
AKR/J	MGP_AKRJ_G0005992	lincRNA gene	Chr2:139160613-139161362 (+)
BALB/cJ	MGP_BALBcJ_G0005995	lincRNA gene	Chr2:135668925-135669674 (+)
C3H/HeJ	MGP_C3HHeJ_G0005944	lincRNA gene	Chr2:139614449-139615198 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0006156	lincRNA gene	Chr2:145223952-145224701 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005485	lincRNA gene	Chr2:129801272-129801989 (+)
CAST/EiJ	MGP_CASTEiJ_G0005879	lincRNA gene	Chr2:139997026-139997775 (+)
CBA/J	MGP_CBAJ_G0005928	lincRNA gene	Chr2:150627965-150628714 (+)
DBA/2J	MGP_DBA2J_G0005949	lincRNA gene	Chr2:134649252-134650001 (+)
FVB/NJ	MGP_FVBNJ_G0005974	lincRNA gene	Chr2:133231443-133232192 (+)
LP/J	MGP_LPJ_G0006030	lincRNA gene	Chr2:141158550-141159299 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005961	lincRNA gene	Chr2:154454243-154454992 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006155	lincRNA gene	Chr2:139174816-139175564 (+)
PWK/PhJ	MGP_PWKPhJ_G0005827	lincRNA gene	Chr2:134271666-134272416 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0005931	lincRNA gene	Chr2:140087965-140088714 (+)

Homology

• Gene Tree
  Gm28214
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm28214
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000099683 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099683	Ensembl Gene Model | MGI Sequence Detail	750	C57BL/6J
transcript	ENSMUST00000185663	Ensembl | MGI Sequence Detail	420	Not Applicable

References

• Summaries
  All 5

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17