Gm28263 Pseudogene Detail

Summary

• Symbol
  Gm28263
• Name
  predicted gene 28263

• Feature Type
  pseudogene
• IDs
  MGI:5578969
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:116561507-116561906 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5578969	pseudogene	Chr1:116561507-116561906 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010305	pseudogene	Chr1:119226091-119226490 (+)
A/J	MGP_AJ_G0010296	pseudogene	Chr1:114969629-114970023 (+)
AKR/J	MGP_AKRJ_G0010264	pseudogene	Chr1:118206394-118206788 (+)
BALB/cJ	MGP_BALBcJ_G0010271	pseudogene	Chr1:115138552-115138946 (+)
C3H/HeJ	MGP_C3HHeJ_G0010207	pseudogene	Chr1:118626991-118627385 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010545	pseudogene	Chr1:123724219-123724618 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010030	pseudogene	Chr1:117615709-117616105 (+)
CBA/J	MGP_CBAJ_G0010176	pseudogene	Chr1:128005278-128005672 (+)
DBA/2J	MGP_DBA2J_G0010209	pseudogene	Chr1:114009013-114009407 (+)
FVB/NJ	MGP_FVBNJ_G0010232	pseudogene	Chr1:112766446-112766842 (+)
LP/J	MGP_LPJ_G0010292	pseudogene	Chr1:120585123-120585522 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010188	pseudogene	Chr1:133891502-133891901 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010508	pseudogene	Chr1:118129256-118129655 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010097	pseudogene	Chr1:118023611-118024016 (+)

Homology

• Gene Tree
  Gm28263
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm28263
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000102033 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102033	Ensembl Gene Model | MGI Sequence Detail	400	C57BL/6J
transcript	ENSMUST00000185884	Ensembl | MGI Sequence Detail	400	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45