Gm28288 Pseudogene Detail

Summary

• Symbol
  Gm28288
• Name
  predicted gene 28288

• Feature Type
  pseudogene
• IDs
  MGI:5578994
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:47358412-47358625 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic

Strain
Comparison

• SNPs within 2kb
  208 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5578994	pseudogene	Chr7:47358412-47358625 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040590	pseudogene	Chr7:48544875-48545314 (-)
A/J	MGP_AJ_G0040582	pseudogene	Chr7:47296655-47296856 (-)
AKR/J	MGP_AKRJ_G0040513	pseudogene	Chr7:48740728-48740929 (-)
BALB/cJ	MGP_BALBcJ_G0040573	pseudogene	Chr7:47212698-47212899 (-)
C3H/HeJ	MGP_C3HHeJ_G0040210	pseudogene	Chr7:49019478-49019679 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0041259	pseudogene	Chr7:50519016-50519229 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037446	pseudogene	Chr7:51168107-51168308 (-)
CAST/EiJ	MGP_CASTEiJ_G0039261	pseudogene	Chr7:40791699-40791900 (-)
CBA/J	MGP_CBAJ_G0040177	pseudogene	Chr7:52182577-52182778 (-)
DBA/2J	MGP_DBA2J_G0040389	pseudogene	Chr7:46805018-46805219 (-)
FVB/NJ	MGP_FVBNJ_G0040313	pseudogene	Chr7:46719298-46719500 (-)
LP/J	MGP_LPJ_G0040431	pseudogene	Chr7:48971077-48971279 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039826	pseudogene	Chr15:48635548-48635750 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041311	pseudogene	Chr7:47755345-47755558 (-)
PWK/PhJ	MGP_PWKPhJ_G0038929	pseudogene	Chr7:40603989-40604190 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038632	pseudogene	Chr7:35915971-35916172 (-)
WSB/EiJ	MGP_WSBEiJ_G0039513	pseudogene	Chr7:48741569-48741770 (-)

Homology

• Gene Tree
  Gm28288
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101817 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101817	Ensembl Gene Model | MGI Sequence Detail	214	C57BL/6J
transcript	ENSMUST00000191019	Ensembl | MGI Sequence Detail	214	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;