Gm28305 Gene Detail

Summary

• Symbol
  Gm28305
• Name
  predicted gene 28305

• Feature Type
  protein coding gene
• IDs
  MGI:5579011
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:103917861-103953078 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic

Strain
Comparison

• SNPs within 2kb
  1272 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579011	protein coding gene	Chr9:103917861-103953078 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0035203	protein coding gene	Chr9:105687251-105725496 (+)
A/J	MGP_AJ_G0035183	protein coding gene	Chr9:101891398-101928223 (+)
AKR/J	MGP_AKRJ_G0035115	protein coding gene	Chr9:104419653-104455895 (+)
BALB/cJ	MGP_BALBcJ_G0035176	protein coding gene	Chr9:101603124-101640994 (+)
C3H/HeJ	MGP_C3HHeJ_G0034886	protein coding gene	Chr9:104801333-104837657 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0035696	protein coding gene	Chr9:108608222-108651082 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032594	protein coding gene	Chr9:99466983-99498117 (+)
CAST/EiJ	MGP_CASTEiJ_G0034198	protein coding gene	Chr9:104676647-104715192 (+)
CBA/J	MGP_CBAJ_G0034855	protein coding gene	Chr9:112384236-112430852 (+)
DBA/2J	MGP_DBA2J_G0035016	protein coding gene	Chr9:101375814-101410030 (+)
FVB/NJ	MGP_FVBNJ_G0034964	protein coding gene	Chr9:100179214-100214751 (+)
LP/J	MGP_LPJ_G0035092	protein coding gene	Chr9:105894336-105929139 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0035003	protein coding gene	Chr9:114159389-114203618 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0035718	protein coding gene	Chr9:104655724-104691549 (+)
PWK/PhJ	MGP_PWKPhJ_G0033905	protein coding gene	Chr9:101658898-101695594 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0033740	protein coding gene	Chr9:104737905-104774696 (+)
WSB/EiJ	MGP_WSBEiJ_G0034318	protein coding gene	Chr9:104532269-104573137 (+)

Homology

• Gene Tree
  Gm28305
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• UniProt
  1

• Ensembl
  ENSMUSG00000101152 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101152	Ensembl Gene Model | MGI Sequence Detail	35218	C57BL/6J
transcript	ENSMUST00000147249	Ensembl | MGI Sequence Detail	365	Not Applicable
polypeptide	ENSMUSP00000115381	Ensembl | MGI Sequence Detail	122	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR002575 Aminoglycoside phosphotransferase
  IPR051787 Effector and Ciliary Development-Associated Protein
  IPR011009 Protein kinase-like domain superfamily
  IPR011990 Tetratricopeptide-like helical domain superfamily
  IPR019734 Tetratricopeptide repeat

References

• Summaries
  All 3
• Earliest
  J:53168 Bairoch A, et al., SWISS-PROT Annotated protein sequence database. Database Release. 1999;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;