Gm28320 Gene Detail

Summary

• Symbol
  Gm28320
• Name
  predicted gene 28320

• Feature Type
  lncRNA gene
• IDs
  MGI:5579026
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:51187468-51189740 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579026	lncRNA gene	Chr1:51187468-51189740 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0036859	sense intronic lncRNA gene	Chr1:50645484-50647758 (+)
A/J	MGP_AJ_G0036847	sense intronic lncRNA gene	Chr1:48934948-48937381 (+)
AKR/J	MGP_AKRJ_G0036796	sense intronic lncRNA gene	Chr1:49972296-49974559 (+)
BALB/cJ	MGP_BALBcJ_G0036838	sense intronic lncRNA gene	Chr1:48758240-48760503 (+)
C3H/HeJ	MGP_C3HHeJ_G0036523	sense intronic lncRNA gene	Chr1:50368441-50370722 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0037351	sense intronic lncRNA gene	Chr1:52786121-52788412 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0034416	sense intronic lncRNA gene	Chr1:42899221-42901455 (-)
CAST/EiJ	MGP_CASTEiJ_G0035713	sense intronic lncRNA gene	Chr1:49834317-49836602 (+)
CBA/J	MGP_CBAJ_G0036499	sense intronic lncRNA gene	Chr1:54186773-54189056 (+)
DBA/2J	MGP_DBA2J_G0036675	sense intronic lncRNA gene	Chr1:48204875-48207155 (+)
FVB/NJ	MGP_FVBNJ_G0036627	sense intronic lncRNA gene	Chr1:47654504-47656784 (+)
LP/J	MGP_LPJ_G0036722	sense intronic lncRNA gene	Chr1:51097217-51099490 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0036632	sense intronic lncRNA gene	Chr1:57236806-57239082 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0037467	sense intronic lncRNA gene	Chr1:50086496-50088759 (+)
PWK/PhJ	MGP_PWKPhJ_G0035406	sense intronic lncRNA gene	Chr1:48071963-48074223 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0035221	sense intronic lncRNA gene	Chr1:49760356-49762637 (+)
WSB/EiJ	MGP_WSBEiJ_G0035915	sense intronic lncRNA gene	Chr1:49898533-49900796 (+)

Homology

• Gene Tree
  Gm28320
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm28320
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000099924 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099924	Ensembl Gene Model | MGI Sequence Detail	2273	C57BL/6J
transcript	ENSMUST00000187777	Ensembl | MGI Sequence Detail	2273	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45