Gm28322 Gene Detail

Summary

• Symbol
  Gm28322
• Name
  predicted gene 28322

• Feature Type
  lncRNA gene
• IDs
  MGI:5579028
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:50943603-50945077 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579028	lncRNA gene	Chr1:50943603-50945077 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004826	lincRNA gene	Chr1:50389501-50390951 (+)
A/J	MGP_AJ_G0004807	lincRNA gene	Chr1:48686839-48688252 (+)
AKR/J	MGP_AKRJ_G0004786	lincRNA gene	Chr1:49712605-49716886 (+)
BALB/cJ	MGP_BALBcJ_G0004789	lincRNA gene	Chr1:48512025-48513424 (+)
C3H/HeJ	MGP_C3HHeJ_G0004737	lincRNA gene	Chr1:50109575-50110884 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004939	lincRNA gene	Chr1:52521914-52523365 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004372	lincRNA gene	Chr1:43144203-43145770 (-)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0004730	lincRNA gene	Chr1:53907301-53908601 (+)
DBA/2J	MGP_DBA2J_G0004748	lincRNA gene	Chr1:47956453-47957860 (+)
FVB/NJ	MGP_FVBNJ_G0004768	lincRNA gene	Chr1:47410297-47411706 (+)
LP/J	MGP_LPJ_G0004827	lincRNA gene	Chr1:50838029-50839493 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0004752	lincRNA gene	Chr1:56950496-56951895 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004943	lincRNA gene	Chr1:49835177-49836635 (+)
PWK/PhJ	MGP_PWKPhJ_G0004644	lincRNA gene	Chr1:47813652-47815065 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0004570	lincRNA gene	Chr1:49502781-49504212 (+)
WSB/EiJ	MGP_WSBEiJ_G0004735	lincRNA gene	Chr1:49643287-49644561 (+)

Homology

• Gene Tree
  Gm28322
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm28322
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000100671 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100671	Ensembl Gene Model | MGI Sequence Detail	1475	C57BL/6J
transcript	ENSMUST00000185627	Ensembl | MGI Sequence Detail	1475	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45