Gm28324 Gene Detail

Summary

• Symbol
  Gm28324
• Name
  predicted gene 28324

• Feature Type
  lncRNA gene
• IDs
  MGI:5579030
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:121729666-121729929 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579030	lncRNA gene	Chr8:121729666-121729929 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007389	lincRNA gene	Chr8:124473960-124474223 (+)
A/J	MGP_AJ_G0007385	lincRNA gene	Chr8:119298754-119299017 (+)
AKR/J	MGP_AKRJ_G0007357	lincRNA gene	Chr8:122778944-122779207 (+)
BALB/cJ	MGP_BALBcJ_G0007363	lincRNA gene	Chr8:119514280-119514543 (+)
C3H/HeJ	MGP_C3HHeJ_G0007307	lincRNA gene	Chr8:123504215-123504478 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007534	lincRNA gene	Chr8:128607788-128608051 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006727	lincRNA gene	Chr8:112168477-112168740 (+)
CAST/EiJ	MGP_CASTEiJ_G0007210	lincRNA gene	Chr8:123523808-123524071 (+)
CBA/J	MGP_CBAJ_G0007289	lincRNA gene	Chr8:133321987-133322250 (+)
DBA/2J	MGP_DBA2J_G0007312	lincRNA gene	Chr8:118508798-118509061 (+)
FVB/NJ	MGP_FVBNJ_G0007333	lincRNA gene	Chr8:117596165-117596428 (+)
LP/J	MGP_LPJ_G0007394	lincRNA gene	Chr8:124594204-124594467 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007310	lincRNA gene	Chr8:135646038-135646301 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007537	lincRNA gene	Chr8:122952448-122952711 (+)
PWK/PhJ	MGP_PWKPhJ_G0007151	lincRNA gene	Chr8:118305583-118305846 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007058	lincRNA gene	Chr8:121663198-121663461 (+)
WSB/EiJ	MGP_WSBEiJ_G0007270	lincRNA gene	Chr8:123707734-123707997 (+)

Homology

• Gene Tree
  Gm28324
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000101886 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000101886	Ensembl Gene Model | MGI Sequence Detail	264	C57BL/6J
transcript	ENSMUST00000187913	Ensembl | MGI Sequence Detail	264	Not Applicable

References

• Summaries
  All 2
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;