Gm28359 Pseudogene Detail

Summary

• Symbol
  Gm28359
• Name
  predicted gene 28359

• Feature Type
  pseudogene
• IDs
  MGI:5579065
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:117669097-117696352 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic

Strain
Comparison

• SNPs within 2kb
  713 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5579065	pseudogene	Chr1:117669097-117696352 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0039914	pseudogene	Chr1:120389229-120411961 (+)
A/J	MGP_AJ_G0039922	pseudogene	Chr1:116040700-116067383 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0039900	pseudogene	Chr1:116315152-116342831 (+)
C3H/HeJ	MGP_C3HHeJ_G0039547	pseudogene	Chr1:119765370-119819091 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0040470	pseudogene	Chr1:124958648-124987891 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0038657	pseudogene	Chr1:118806645-118892367 (+)
CBA/J	MGP_CBAJ_G0039514	pseudogene	Chr1:129226658-129260504 (+)
DBA/2J	MGP_DBA2J_G0039716	pseudogene	Chr1:115095282-115120921 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0039751	pseudogene	Chr1:121749536-121774798 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0040564	pseudogene	Chr1:119224734-119253685 (+)
PWK/PhJ	MGP_PWKPhJ_G0038338	pseudogene	Chr1:114051605-114365453 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0038877	pseudogene	Chr1:119129985-119155805 (+)

Homology

• Gene Tree
  Gm28359
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm28359
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00000100527 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000100527	Ensembl Gene Model | MGI Sequence Detail	27256	C57BL/6J
transcript	ENSMUST00000187470	Ensembl | MGI Sequence Detail	1322	Not Applicable

References

• Summaries
  All 6

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45